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PLM4_65_b1_redo_sep16_scaffold_2384

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_2384_1
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..630
DNA (630bp) protein (210aa)
Protease HtpX homolog Tax=Burkholderia sp. YI23 RepID=G8MK11_9BURK
htpX; protease HtpX homolog
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM4_65_b1_redo_sep16_scaffold_2384_2
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(687..1967)
DNA (1281bp) protein (427aa)
Alpha/beta hydrolase fold protein Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z0R9_DESAT
alpha/beta hydrolase fold protein
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
PLM4_65_b1_redo_sep16_scaffold_2384_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2072..3616)
DNA (1545bp) protein (515aa)
hypothetical protein Tax=Wenxinia marina RepID=UPI0003764C9E
carboxylyase-like protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_65_b1_redo_sep16_scaffold_2384_4
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3840..5354
DNA (1515bp) protein (505aa)
ABC-type sugar transport system, ATPase component Tax=Burkholderia sp. BT03 RepID=J2J9P1_9BURK
Sugar ABC transporter ATPase {ECO:0000313|EMBL:KJK25146.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
Ribose ABC transport system, ATP-binding protein RbsA
PLM4_65_b1_redo_sep16_scaffold_2384_5
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5367..6299
DNA (933bp) protein (311aa)
Monosaccharide ABC transporter membrane protein, CUT2 family Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46TP6_CUPPJ
inner-membrane translocator
ABC transporter permease {ECO:0000313|EMBL:EYS85948.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
PLM4_65_b1_redo_sep16_scaffold_2384_6
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6296..7267
DNA (972bp) protein (324aa)
Sugar ABC transporter permease protein Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I1T7_AZOC5
sugar ABC transporter permease
Sugar ABC transporter permease protein {ECO:0000313|EMBL:BAF87416.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
PLM4_65_b1_redo_sep16_scaffold_2384_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7293..8273
DNA (981bp) protein (327aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46TP4_CUPPJ
Variovorax paradoxus strain MEDvA23 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35365.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
periplasmic binding protein/LacI transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_2384_8
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8332..8796
DNA (465bp) protein (155aa)
(2Fe-2S)-binding protein Tax=Herbaspirillum lusitanum RepID=UPI0002EBD93E
(2Fe-2S)-binding domain-containing protein
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ACK52278.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
PLM4_65_b1_redo_sep16_scaffold_2384_9
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

8807..11092
DNA (2286bp) protein (762aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI0002D69514
aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM4_65_b1_redo_sep16_scaffold_2384_10
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11178..12794)
DNA (1617bp) protein (539aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Burkholderia gladioli genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
GMC-type oxidoreductase
Tax=CG_Rhodocyc_01
PLM4_65_b1_redo_sep16_scaffold_2384_11
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12820..13533)
DNA (714bp) protein (238aa)
ABC transporter related Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKP3_SYNFM
ABC transporter-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_65_b1_redo_sep16_scaffold_2384_12
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13530..14279)
DNA (750bp) protein (250aa)
ABC transporter related Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKP4_SYNFM
ABC transporter-like protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_65_b1_redo_sep16_scaffold_2384_13
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14282..15301)
DNA (1020bp) protein (340aa)
Inner-membrane translocator bin=GWC2_Syntrophus__56_31 species=unknown genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
amino acid/amide ABC transporter membrane protein 2, HAAT family
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_65_b1_redo_sep16_scaffold_2384_14
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15298..16185)
DNA (888bp) protein (296aa)
Inner-membrane translocator bin=GWC2_Syntrophus__56_31 species=Cupriavidus pinatubonensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
inner-membrane translocator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_65_b1_redo_sep16_scaffold_2384_15
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16272..17576)
DNA (1305bp) protein (435aa)
Extracellular ligand-binding receptor Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKP5_SYNFM
extracellular ligand-binding receptor
Tax=CG_Rhodocyc_01
PLM4_65_b1_redo_sep16_scaffold_2384_16
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17724..18155)
DNA (432bp) protein (144aa)
hypothetical protein Tax=Thioalkalivibrio RepID=UPI00037842C2
Uncharacterized protein {ECO:0000313|EMBL:KHD08307.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomargarita nelsonii.;"
twitching motility protein PilT
PLM4_65_b1_redo_sep16_scaffold_2384_17
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18155..18382)
DNA (228bp) protein (76aa)
Prevent-host-death family protein Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DLK9_9GAMM
prevent-host-death protein
Prevent-host-death protein {ECO:0000313|EMBL:AHE97815.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
PLM4_65_b1_redo_sep16_scaffold_2384_18
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18394..19428
DNA (1035bp) protein (345aa)
Pseudouridine synthase Tax=Plesiocystis pacifica SIR-1 RepID=A6G5N3_9DELT
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:AKF08102.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
pseudouridine synthase
PLM4_65_b1_redo_sep16_scaffold_2384_19
R_OP11_Roizmanbacteria_37_12, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(19545..20018)
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Haloterrigena salina JCM 13891 RepID=M0C1Y1_9EURY
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_37_12_curated
PLM4_65_b1_redo_sep16_scaffold_2384_20
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20315..20548
DNA (234bp) protein (78aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037C41C5
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EOR94682.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
Displaying 20 items

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