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PLM4_65_b1_redo_sep16_scaffold_7946

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_7946_1
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..520)
DNA (519bp) protein (173aa)
sulfide dehydrogenase (flavocytochrome), flavoprotein subunit (EC:1.-.-.-)
Sulfide dehydrogenase (Flavocytochrome), flavoprotein subunit Tax=Dechloromonas aromatica (strain RCB) RepID=Q47BB4_DECAR
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_b1_redo_sep16_scaffold_7946_2
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(530..844)
DNA (315bp) protein (105aa)
Cytochrome c, class I Tax=Thauera sp. 28 RepID=N6YS81_9RHOO
cytochrome c553
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM4_65_b1_redo_sep16_scaffold_7946_3
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(919..3210)
DNA (2292bp) protein (764aa)
clpA; ATP-dependent Clp protease ATP-binding subunit clpA (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding protein Tax=Methyloversatilis universalis RepID=UPI0003709132
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
PLM4_65_b1_redo_sep16_scaffold_7946_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3213..3521)
DNA (309bp) protein (103aa)
ATP-dependent Clp protease adapter protein ClpS Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=CLPS_NITMU
ATP-dependent Clp protease adaptor protein ClpS
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM4_65_b1_redo_sep16_scaffold_7946_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3867..4073
DNA (207bp) protein (69aa)
Cold shock-like protein CspD (CSP-D) Tax=Oxalobacteraceae RepID=A4G7U0_HERAR
cspD; Cold shock protein CspD
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM4_65_b1_redo_sep16_scaffold_7946_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4114..4368)
DNA (255bp) protein (85aa)
isocitrate dehydrogenase Tax=Gemmata obscuriglobus RepID=UPI00016C520A
isocitrate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
PLM4_65_b1_redo_sep16_scaffold_7946_7
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4489..4695
DNA (207bp) protein (69aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM4_65_b1_redo_sep16_scaffold_7946_8
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4769..5215
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJF3_AZOSU
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_b1_redo_sep16_scaffold_7946_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5275..5763)
DNA (489bp) protein (163aa)
hypothetical protein bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_b1_redo_sep16_scaffold_7946_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5766..5864)
DNA (99bp) protein (33aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_65_b1_redo_sep16_scaffold_7946_11
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5979..7334)
DNA (1356bp) protein (452aa)
Exodeoxyribonuclease 7 large subunit Tax=Sulfuricella denitrificans skB26 RepID=S6B574_9PROT
exodeoxyribonuclease VII large subunit
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_b1_redo_sep16_scaffold_7946_12
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7715..8350
DNA (636bp) protein (212aa)
Biopolymer transport protein Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJD0_AZOSU
biopolymer transport protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM4_65_b1_redo_sep16_scaffold_7946_13
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8347..8763
DNA (417bp) protein (139aa)
Biopolymer transport protein ExbD/TolR Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YA90_NITMU
biopolymer transport protein ExbD/TolR
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_b1_redo_sep16_scaffold_7946_14
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8798..9775
DNA (978bp) protein (326aa)
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CRL5_SIDLE
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_b1_redo_sep16_scaffold_7946_15
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9756..9941
DNA (186bp) protein (62aa)
UPF0434 protein SCD_n01892 Tax=Sulfuricella denitrificans skB26 RepID=S6ACM5_9PROT
hypothetical protein
Tax=CG_Beta_01
PLM4_65_b1_redo_sep16_scaffold_7946_16
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9982..10782
DNA (801bp) protein (267aa)
3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase Tax=Burkholderia sp. H160 RepID=B5WSI3_9BURK
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM4_65_b1_redo_sep16_scaffold_7946_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10848..11078
DNA (231bp) protein (77aa)
adk; adenylate kinase (EC:2.7.4.3)
adenylate kinase Tax=Uliginosibacterium gangwonense RepID=UPI00035E3DA3
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Displaying 17 items

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