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PLM4_65_b1_redo_sep16_scaffold_3151

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_3151_1
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..179)
DNA (177bp) protein (59aa)
NCS1 nucleoside transporter Tax=Osedax symbiont Rs1 RepID=S6HAA4_9GAMM
NCS1 nucleoside transporter {ECO:0000313|EMBL:EPJ45163.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs1.;"
NCS1 nucleoside transporter family
PLM4_65_b1_redo_sep16_scaffold_3151_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(188..1588)
DNA (1401bp) protein (467aa)
Dihydropyrimidinase bin=GWF2_Melioribacter_38_21 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
dihydropyrimidinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_3151_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(1638..2774)
DNA (1137bp) protein (379aa)
dihydropyrimidine dehydrogenase (EC:1.3.1.1); K00207 dihydropyrimidine dehydrogenase (NADP+) [EC:1.3.1.2] bin=bin8_Chloro species=Oceanicola sp. S124 genus=Oceanicola taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein, dihydrooronate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_3151_4
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2878..3906)
DNA (1029bp) protein (343aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00037214E7
WD40-like Beta Propeller Repeat {ECO:0000313|EMBL:GAO02153.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_3151_5
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(4002..4871)
DNA (870bp) protein (290aa)
Beta-alanine synthase bin=GWC2_Ignavibacteria_38_9 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM4_65_b1_redo_sep16_scaffold_3151_6
Halomonas elongata, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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4982..5344
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1VB47_HALED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBV42108.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB; 2198 / 1H9).;"
PLM4_65_b1_redo_sep16_scaffold_3151_7
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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5356..6393
DNA (1038bp) protein (346aa)
Tetratricopeptide TPR_4 bin=GWF1_Xanthomonadales_69_6 species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
TPR repeat-containing protein
Tax=GWF1_Xanthomonadales_69_6_curated
PLM4_65_b1_redo_sep16_scaffold_3151_8
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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6666..12359
DNA (5694bp) protein (1898aa)
cell surface glycoprotein (s-layer protein) related protein bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
cell surface glycoprotein (s-layer protein)-like protein
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
PLM4_65_b1_redo_sep16_scaffold_3151_9
unknown

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12463..13140
DNA (678bp) protein (226aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_3151_10
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

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13250..14755
DNA (1506bp) protein (502aa)
Gluconate permease gntP Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AX03_NATA1
Gluconate transporter
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_b1_redo_sep16_scaffold_3151_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(14859..15629)
DNA (771bp) protein (257aa)
dehydrogenase bin=CNBR_ACIDO species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AGA26954.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM4_65_b1_redo_sep16_scaffold_3151_12
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(15665..16777)
DNA (1113bp) protein (371aa)
hypothetical protein Tax=Eudoraea adriatica RepID=UPI0003640F5B
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EOZ96494.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
xylose isomerase
PLM4_65_b1_redo_sep16_scaffold_3151_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(16770..17828)
DNA (1059bp) protein (353aa)
Oxidoreductase domain protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01QZ9_SOLUE
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABJ87921.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Displaying 13 items

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