ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_9549

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_9549_1
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

1..1953
DNA (1953bp) protein (651aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003763D11
DNA topoisomerase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM4_65_b1_redo_sep16_scaffold_9549_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2220..3506
DNA (1287bp) protein (429aa)
Mandelate racemase/muconate lactonizing enzyme-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARQ6_RUBXD
Mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:AHG93141.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_9549_3
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3520..4890
DNA (1371bp) protein (457aa)
Putative uncharacterized protein Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CGG3_ROBBH
Uncharacterized protein {ECO:0000313|EMBL:KGE85628.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_9549_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(4963..5769)
DNA (807bp) protein (269aa)
NIPSNAP family containing protein Tax=Pedosphaera parvula Ellin514 RepID=B9XCV7_9BACT
NIPSNAP family containing protein {ECO:0000313|EMBL:EEF62303.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NIPSNAP family containing protein
PLM4_65_b1_redo_sep16_scaffold_9549_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

5893..6426
DNA (534bp) protein (178aa)
Putative uncharacterized protein Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CN98_ROBBH
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_9549_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

6423..7718
DNA (1296bp) protein (432aa)
Probable NADH-dependent dehydrogenase Tax=Planctomyces maris DSM 8797 RepID=A6BZ31_9PLAN
oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_9549_7
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

7750..8433
DNA (684bp) protein (228aa)
Transcriptional regulator, GntR family Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CB55_THET1
Crp family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACZ42020.1}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM4_65_b1_redo_sep16_scaffold_9549_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

8459..9904
DNA (1446bp) protein (482aa)
putative NADH-dependent oxidoreductase bin=CNBR_ACIDO species=Rhodopirellula maiorica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
NADH:flavin oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_9549_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

9901..10071
DNA (171bp) protein (57aa)
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 bin=GWA2_Bacteroidetes_42_15 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 9 items

View Taxonomy