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PLM4_65_b1_redo_sep16_scaffold_1193

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1193_1
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(137..1033)
DNA (897bp) protein (299aa)
Uncharacterized protein Tax=Cyclobacterium qasimii M12-11B RepID=S7VGT4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EPR69440.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
LmbE family protein
PLM4_65_b1_redo_sep16_scaffold_1193_2
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(1060..1851)
DNA (792bp) protein (264aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035CC7C0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKC30785.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus subsp. pacificus DSM 12653.;"
PLM4_65_b1_redo_sep16_scaffold_1193_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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1899..2900
DNA (1002bp) protein (334aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI000375B75D
putative acetamidase/formamidase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1193_4
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3223..4656
DNA (1434bp) protein (478aa)
Glutamate--ammonia ligase Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U711_MYXSD
glutamate--ammonia ligase
Glutamate--ammonia ligase {ECO:0000313|EMBL:AGC42274.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
PLM4_65_b1_redo_sep16_scaffold_1193_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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4826..5698
DNA (873bp) protein (291aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJE8_KORVE
sugar ABC transporter substrate-binding protein
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:ABF43002.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_65_b1_redo_sep16_scaffold_1193_6
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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5716..7455
DNA (1740bp) protein (580aa)
Para-aminobenzoate synthase, subunit I Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LVG5_DESBD
Para-aminobenzoate synthase, subunit I {ECO:0000313|EMBL:CDI03820.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
para-aminobenzoate synthase subunit I
PLM4_65_b1_redo_sep16_scaffold_1193_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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7557..8762
DNA (1206bp) protein (402aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI00017460DD
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_65_b1_redo_sep16_scaffold_1193_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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8753..9430
DNA (678bp) protein (226aa)
Putative uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1193_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

9430..11163
DNA (1734bp) protein (578aa)
integral membrane sensor signal transduction histidine kinase (EC:2.7.13.3)
Integral membrane sensor signal transduction histidine kinase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UAW7_ANASK
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1193_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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11160..12533
DNA (1374bp) protein (458aa)
Fis-type Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I3T8_AZOC5
Fis-type protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1193_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

12681..13058
DNA (378bp) protein (126aa)
hypothetical protein Tax=Gillisia marina RepID=UPI00029A531E
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1193_12
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(13177..15555)
DNA (2379bp) protein (793aa)
Uncharacterized protein conserved in bacteria bin=CD_OP8_4m species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RBG_13_Planctomycetes_63_9_curated
PLM4_65_b1_redo_sep16_scaffold_1193_13
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15729..17351
DNA (1623bp) protein (541aa)
Glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase FtcD {ECO:0000313|EMBL:EMS79742.1}; EC=2.1.2.5 {ECO:0000313|EMBL:EMS79742.1};; EC=4.3.1.4 {ECO:0000313|EMBL:EMS79742.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source="Desulfotignum phosphitoxidans DSM 13687.;"
ftcD1; protein FtcD1 (EC:2.1.2.5 4.3.1.4)
Glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase FtcD Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G5H8_9DELT
PLM4_65_b1_redo_sep16_scaffold_1193_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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17371..18912
DNA (1542bp) protein (514aa)
Probable DNA ligase {ECO:0000255|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000255|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000255|HAMAP-Rule:MF_00407}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
Probable DNA ligase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=DNLI_ANADF
ligB; ATP-dependent DNA ligase
PLM4_65_b1_redo_sep16_scaffold_1193_15
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(18915..24380)
DNA (5466bp) protein (1822aa)
Putative excinuclease ABC subunit Tax=Azoarcus sp. (strain BH72) RepID=A1K1K1_AZOSB
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
uvrA1; putative excinuclease ABC subunit
PLM4_65_b1_redo_sep16_scaffold_1193_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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24476..26218
DNA (1743bp) protein (581aa)
Excinuclease ABC subunit C Tax=Bdellovibrio bacteriovorus str. Tiberius RepID=K7YJW7_BDEBC
uvrC; excinuclease ABC subunit C
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_1193_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

26197..27279
DNA (1083bp) protein (361aa)
Metallophosphoesterase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UKU8_ANASK
metallophosphoesterase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_b1_redo_sep16_scaffold_1193_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

27337..28602
DNA (1266bp) protein (422aa)
Putative hydrolase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A993_GEMAT
putative hydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 18 items

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