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PLM4_65_b1_redo_sep16_scaffold_1976

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_1976_1
Burkholderia sp. KJ006, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2..202)
DNA (201bp) protein (67aa)
Glyceraldehyde-3-phosphate dehydrogenase, putative Tax=Burkholderia sp. KJ006 RepID=I2DTQ0_9BURK
glyceraldehyde-3-phosphate dehydrogenase, putative
Glyceraldehyde-3-phosphate dehydrogenase, putative {ECO:0000313|EMBL:AFJ88026.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. KJ006.;"
PLM4_65_b1_redo_sep16_scaffold_1976_2
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(199..627)
DNA (429bp) protein (143aa)
Putative glyceraldehyde-3-phosphate dehydrogenase Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QRR9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36040.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
aldehyde dehydrogenase
PLM4_65_b1_redo_sep16_scaffold_1976_3
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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839..6253
DNA (5415bp) protein (1805aa)
Putative uncharacterized protein bin=GWA2__Bacteriovorax-rel_49_15 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2__Bacteriovorax-rel_49_15 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM4_65_b1_redo_sep16_scaffold_1976_4
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(6291..9023)
DNA (2733bp) protein (911aa)
Uncharacterized protein Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X702_ACISM
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
PLM4_65_b1_redo_sep16_scaffold_1976_5
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

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comp(9038..11548)
DNA (2511bp) protein (837aa)
galactose oxidase (EC:1.1.3.9)
Galactose oxidase Tax=Frankia sp. EUN1f RepID=D3D7I1_9ACTO
Tax=RBG_13_Chloroflexi_56_8_curated
PLM4_65_b1_redo_sep16_scaffold_1976_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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11905..13791
DNA (1887bp) protein (629aa)
PAS sensor protein Tax=Holophaga foetida DSM 6591 RepID=H1P1L7_9BACT
GTPase-like protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_1976_7
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(13752..14369)
DNA (618bp) protein (206aa)
Rhodanese domain protein bin=GWA2_Ignavibacteriae_54_16_partial species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
rhodanese domain-containing protein
Tax=GWA2_Ignavibacteria_54_16_curated
PLM4_65_b1_redo_sep16_scaffold_1976_8
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(14366..14893)
DNA (528bp) protein (176aa)
Putative transporter component bin=GWA2_Ignavibacteriae_54_16_partial species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteriae_54_16_partial organism_group=Ignavibacteria
transporter component
Tax=GWA2_Ignavibacteria_54_16_curated
PLM4_65_b1_redo_sep16_scaffold_1976_9
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(15107..15448)
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AG69_IGNAJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH47976.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
PLM4_65_b1_redo_sep16_scaffold_1976_10
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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15777..16400
DNA (624bp) protein (208aa)
Uncharacterized protein Tax=Caenispirillum salinarum AK4 RepID=K9GMP0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKV26367.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
hypothetical protein
PLM4_65_b1_redo_sep16_scaffold_1976_11
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(16419..17771)
DNA (1353bp) protein (451aa)
Response regulator receiver:Sigma-54 factor, interaction region:Helix-turn-helix, Fis-type:ATPase associated with various cellular activities, AAA_5 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YP76_9CHLB
Response regulator receiver:Sigma-54 factor, interaction region:Helix-turn-helix, Fis-type:ATPase associated with various cellular activities, AAA_5 {ECO:0000313|EMBL:EAT58111.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium ferrooxidans DSM 13031.;"
Fis family transcriptional regulator
PLM4_65_b1_redo_sep16_scaffold_1976_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(17755..19488)
DNA (1734bp) protein (578aa)
Sensor protein ZraS bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-sensor signal transduction histidine kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_b1_redo_sep16_scaffold_1976_13
unknown

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comp(19506..19667)
DNA (162bp) protein (54aa)

This feature has no annotations

PLM4_65_b1_redo_sep16_scaffold_1976_14
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(19686..20384)
DNA (699bp) protein (233aa)
Uncharacterized protein Tax=Arthrospira platensis RepID=K6E0M4_ARTPT
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAI91351.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platensis (strain NIES-39 / IAM M-135) (Spirulina; platensis).;"
PLM4_65_b1_redo_sep16_scaffold_1976_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(20624..21997)
DNA (1374bp) protein (458aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000371EEE6
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AHG88649.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_65_b1_redo_sep16_scaffold_1976_16
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22061..22474)
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XQC7_9BACT
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
Displaying 16 items

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