ggKbase home page

PLM4_65_b1_redo_sep16_scaffold_11600

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_b1_redo_sep16_scaffold_11600_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

1..1218
DNA (1218bp) protein (406aa)
Serine/threonine protein kinase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIA8_KORVE
serine/threonine protein kinase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_11600_trna_1
unknown

Not on your lists

comp(1263..1348)
DNA (86bp)
transferRNA Leu
PLM4_65_b1_redo_sep16_scaffold_11600_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1401..2522
DNA (1122bp) protein (374aa)
hypothetical protein Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B7A3AB
Selenocysteine lyase {ECO:0000313|EMBL:CDM67064.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
class V aminotransferase
PLM4_65_b1_redo_sep16_scaffold_11600_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

2624..3172
DNA (549bp) protein (183aa)
CarD family transcriptional regulator; K07736 CarD family transcriptional regulator bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
CarD family transcriptional regulator
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_11600_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

3318..3659
DNA (342bp) protein (114aa)
Integration host factor, beta subunit, putative Tax=uncultured marine bacterium 105 RepID=Q6SI39_9BACT
nucleoid DNA-binding protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_11600_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

3688..4044
DNA (357bp) protein (119aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_11600_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

4052..4429
DNA (378bp) protein (126aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_11600_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(4433..5077)
DNA (645bp) protein (215aa)
HAD family hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
HAD family hydrolase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_11600_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

5136..6542
DNA (1407bp) protein (469aa)
Cell wall surface anchor family protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CQI0_PSEUX
cell wall surface anchor family protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_11600_9
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

6767..7714
DNA (948bp) protein (316aa)
Arabinose efflux permease Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK95_CHLTF
Arabinose efflux permease
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_11600_10
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

7749..8132
DNA (384bp) protein (128aa)
Alkylhydroperoxidase AhpD family core domain protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK93_CHLTF
alkylhydroperoxidase AhpD family core domain-containing protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_b1_redo_sep16_scaffold_11600_11
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(8141..9037)
DNA (897bp) protein (299aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003703EE7
OmpA/MotB domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
Displaying 12 items

View Taxonomy