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PLM4_65_coex_sep16_scaffold_201

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Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_201_1
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..316)
DNA (315bp) protein (105aa)
Pseudouridine synthase bin=GWB2_Geobacter-like_52_12 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
RNA pseudouridine synthase, RluA family
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
PLM4_65_coex_sep16_scaffold_201_2
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

790..1494
DNA (705bp) protein (235aa)
putative beta-phosphoglucomutase (EC:5.4.2.6) bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
putative beta-phosphoglucomutase (EC:5.4.2.6)
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
PLM4_65_coex_sep16_scaffold_201_3
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1519..1815
DNA (297bp) protein (99aa)
Uncharacterized protein Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y855_NITMU
putative protein-disulfide isomerase
Tax=RBG_16_Gamma2_65_34_curated
PLM4_65_coex_sep16_scaffold_201_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1812..2468
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLS6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_coex_sep16_scaffold_201_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2624..3280
DNA (657bp) protein (219aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2ABE4
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM4_65_coex_sep16_scaffold_201_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3318..3605
DNA (288bp) protein (96aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PB76_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM4_65_coex_sep16_scaffold_201_7
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3683..4117
DNA (435bp) protein (145aa)
Putative signal transduction protein with CBS domains Tax=Thermosinus carboxydivorans Nor1 RepID=A1HSL2_9FIRM
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:EAX46982.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_201_8
unknown

Not on your lists

4266..4607
DNA (342bp) protein (114aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_201_9
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4567..5139
DNA (573bp) protein (191aa)
Putative uncharacterized protein Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QME3_DESAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACN16460.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
PLM4_65_coex_sep16_scaffold_201_10
RLO_PLX_64_10, Bacteria

Not on your lists

5583..7265
DNA (1683bp) protein (561aa)
Transcriptional regulator, NifA subfamily, Fis Family Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026M7_SOLUE
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_65_coex_sep16_scaffold_201_11
Nitrosomonas communis, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8229..10763
DNA (2535bp) protein (845aa)
Kelch repeat protein Tax=Acanthamoeba castellanii str. Neff RepID=L8GVP6_ACACA
Uncharacterized protein {ECO:0000313|EMBL:AKH38516.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas communis.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_201_12
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

10856..11419
DNA (564bp) protein (188aa)
hypothetical protein Tax=Marinobacterium rhizophilum RepID=UPI00035DFEFF
CHRD domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM4_65_coex_sep16_scaffold_201_13
unknown

Not on your lists

11463..12029
DNA (567bp) protein (189aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_201_14
unknown

Not on your lists

12145..12864
DNA (720bp) protein (240aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_201_15
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13159..13593)
DNA (435bp) protein (145aa)
Nucleic acid binding protein Tax=uncultured microorganism RepID=F8UH37_9ZZZZ
twitching motility protein PilT
Twitching motility protein PilT {ECO:0000313|EMBL:AJF06049.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
PLM4_65_coex_sep16_scaffold_201_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13590..13850)
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Spiribacter sp. UAH-SP71 RepID=U5T921_9GAMM
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_65_coex_sep16_scaffold_201_17
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13993..14373
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Nitrospina gracilis 3/211 RepID=M1YKK5_9BACT
Hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM4_65_coex_sep16_scaffold_201_trna_1
unknown

Not on your lists

comp(14430..14502)
DNA (73bp)
transferRNA Phe
PLM4_65_coex_sep16_scaffold_201_18
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists


comp(14569..16515)
DNA (1947bp) protein (649aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase Tax=Candidatus Nitrospira defluvii RepID=D8PH89_9BACT
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_201_19
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(16641..17312)
DNA (672bp) protein (224aa)
Putative PSP1-like protein Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D023_DESAJ
putative PSP1-like protein
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_201_20
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(17309..18343)
DNA (1035bp) protein (345aa)
holB; DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III, delta' subunit Tax=Candidatus Nitrospira defluvii RepID=D8PH88_9BACT
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_201_21
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(18340..19014)
DNA (675bp) protein (225aa)
dTMP kinase (EC:2.7.4.9)
Thymidylate kinase (Fragment) Tax=Heliobacillus mobilis RepID=Q8GDS3_HELMO
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_201_22
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(19011..20807)
DNA (1797bp) protein (599aa)
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_201_23
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

20946..21677
DNA (732bp) protein (244aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PH86_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_201_24
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

21674..23107
DNA (1434bp) protein (478aa)
glmU; bifunctional protein GlmU (EC:2.7.7.23 2.3.1.157)
Bifunctional protein GlmU Tax=Candidatus Nitrospira defluvii RepID=D8PH85_9BACT
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_201_25
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

23123..24955
DNA (1833bp) protein (611aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
glutamine amidotransferase
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_201_26
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

24970..27234
DNA (2265bp) protein (755aa)
UvrD/REP helicase bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
ATP-dependent DNA helicase PcrA
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_201_27
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

27249..27536
DNA (288bp) protein (96aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Tax=Thermoanaerobacter RepID=D3T7G0_THEIA
glutamyl-tRNA(Gln) amidotransferase subunit C
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_201_28
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

27562..27912
DNA (351bp) protein (117aa)
Aspartate 1-decarboxylase Tax=Leptospirillum RepID=J9ZF76_LEPFM
aspartate 1-decarboxylase
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_201_29
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

27949..29445
DNA (1497bp) protein (499aa)
metal dependent phosphohydrolase (EC:2.7.7.19); K00970 poly(A) polymerase [EC:2.7.7.19] bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
polynucleotide adenylyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Displaying items 1-30 of 52 in total

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