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PLM4_65_coex_sep16_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 147 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_11_1
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50..3958)
DNA (3909bp) protein (1303aa)
UPI0003CFF789 related cluster Tax=unknown RepID=UPI0003CFF789
Uncharacterized protein {ECO:0000313|EMBL:ESZ72358.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_11_2
unknown

Not on your lists

comp(3913..4038)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_11_3
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4177..4860)
DNA (684bp) protein (228aa)
JerF Tax=Sorangium cellulosum RepID=A1YBT9_SORCE
Methyltransferase type 12 {ECO:0000313|EMBL:KIJ77791.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
type 12 methyltransferase
PLM4_65_coex_sep16_scaffold_11_4
Pseudomonas sp. GM67, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5145..5684)
DNA (540bp) protein (180aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-604-B04 RepID=UPI000371051D
Uncharacterized protein {ECO:0000313|EMBL:EJM91432.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM67.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_11_5
Mycobacterium ulcerans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6114..7118)
DNA (1005bp) protein (335aa)
Uncharacterized protein {ECO:0000313|EMBL:EUA91201.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium ulcerans str. Harvey.;"
PLM4_65_coex_sep16_scaffold_11_6
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(7342..8025)
DNA (684bp) protein (228aa)
JerF Tax=Sorangium cellulosum RepID=A1YBT9_SORCE
Methyltransferase type 12 {ECO:0000313|EMBL:KIJ77791.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
Methyltransferase type 12
PLM4_65_coex_sep16_scaffold_11_7
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8180..9259)
DNA (1080bp) protein (360aa)
Uncharacterized protein Tax=delta proteobacterium NaphS2 RepID=D8EWW2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EFK11981.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_11_8
RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9341..10267)
DNA (927bp) protein (309aa)
Tax=RBG_19FT_COMBO_Gammaproteobacteria_61_10_curated
PLM4_65_coex_sep16_scaffold_11_9
unknown

Not on your lists

comp(10292..12160)
DNA (1869bp) protein (623aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_11_10
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(12180..14126)
DNA (1947bp) protein (649aa)
Peptidase Tax=Sulfuricella denitrificans skB26 RepID=S6B5U2_9PROT
peptidase
Tax=BJP_IG2158_Nitrospirales_45_240
PLM4_65_coex_sep16_scaffold_11_11
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

14779..15582
DNA (804bp) protein (268aa)
Segregation and condensation protein A bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
scpA; segregation and condensation protein A
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_11_12
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

15640..16488
DNA (849bp) protein (283aa)
HEAT repeat protein bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Natrinema taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
HEAT repeat protein
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_11_13
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

16630..17349
DNA (720bp) protein (240aa)
Segregation and condensation protein B bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
scpB; segregation and condensation protein B
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_11_14
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

17346..18290
DNA (945bp) protein (315aa)
MinD-related ATP-binding protein bin=GWC2_Nitrospirae-rel_56_14 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
ATP-binding protein
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_11_15
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

18384..19079
DNA (696bp) protein (232aa)
Heat shock protein DnaJ domain protein bin=GWC2_Nitrospirae-rel_56_14 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
heat shock protein DnaJ domain protein
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_11_16
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

Not on your lists

comp(19154..22339)
DNA (3186bp) protein (1062aa)
Putative cation efflux system protein silA bin=GWB2_Nitrospirae_rel_47_37 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
silA; cation efflux system protein silA
Tax=GWB2_Nitrospirae_47_37_curated
PLM4_65_coex_sep16_scaffold_11_17
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22504..23697)
DNA (1194bp) protein (398aa)
Efflux transporter, RND family, MFP subunit bin=GWB2_Nitrospirae_rel_47_37 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=CG_Delta_01
PLM4_65_coex_sep16_scaffold_11_18
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23730..25040)
DNA (1311bp) protein (437aa)
Outer membrane efflux protein bin=GWF2_Nitrospirae_44_13 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
outer membrane efflux protein
Tax=CG_Delta_06
PLM4_65_coex_sep16_scaffold_11_19
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25051..25440)
DNA (390bp) protein (130aa)
Putative uncharacterized protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=CG_Delta_06
PLM4_65_coex_sep16_scaffold_11_20
unknown

Not on your lists

25464..25802
DNA (339bp) protein (113aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_11_21
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(25914..26750)
DNA (837bp) protein (279aa)
Putative uncharacterized protein bin=GWA2_Elusi_like_61_42 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hypothetical protein
Tax=GWC2_Nitrospirae_57_9_curated
PLM4_65_coex_sep16_scaffold_11_22
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(26752..27177)
DNA (426bp) protein (142aa)
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
PLM4_65_coex_sep16_scaffold_11_23
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(27242..27628)
DNA (387bp) protein (129aa)
Uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cb-type cytochrome c oxidase subunit III
Tax=GWF2_Nitrospirae_44_13_curated
PLM4_65_coex_sep16_scaffold_11_24
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(27686..28663)
DNA (978bp) protein (326aa)
Metal dependent phosphohydrolase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDP4_GEOUR
metal dependent phosphohydrolase
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
PLM4_65_coex_sep16_scaffold_11_25
GWA2_Elusimicrobia_62_23_curated, Elusimicrobia, Bacteria

Not on your lists

comp(28752..29342)
DNA (591bp) protein (197aa)
hypothetical protein bin=GWB2_Elusimicrobia_63_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_62_23_curated
PLM4_65_coex_sep16_scaffold_11_26
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(29336..30031)
DNA (696bp) protein (232aa)
methyltransferase type 11 bin=bin9_gal15 species=Nitrosomonas sp. AL212 genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
type 11 methyltransferase
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
PLM4_65_coex_sep16_scaffold_11_27
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(30079..30714)
DNA (636bp) protein (212aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000373E345
CHRD domain-containing protein
Tax=GWC2_Nitrospirae_57_9_curated
PLM4_65_coex_sep16_scaffold_11_28

Not on your lists

31285..32775
DNA (1491bp) protein (497aa)
Fis family transcriptional regulator Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B634C8
Uncharacterized protein {ECO:0000313|EMBL:KKK67251.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Fis family transcriptional regulator
PLM4_65_coex_sep16_scaffold_11_29
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

33095..33631
DNA (537bp) protein (179aa)
OsmC family protein bin=GWC2_Nitrospirae-rel_56_14 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
OsmC family protein
Tax=GWC2_Nitrospirae_57_9_curated
PLM4_65_coex_sep16_scaffold_11_30
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

33632..34048
DNA (417bp) protein (139aa)
Tax=GWC2_Nitrospirae_57_9_curated
Displaying items 1-30 of 147 in total

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