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PLM4_65_coex_sep16_scaffold_43

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_43_1
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..3312
DNA (3312bp) protein (1104aa)
YD repeat-containing protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M6Z5_GEODF
YD repeat-containing protein
RHS repeat protein {ECO:0000313|EMBL:ACM22016.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_43_2
unknown

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3354..3779
DNA (426bp) protein (142aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_43_3
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(4325..4756)
DNA (432bp) protein (144aa)
id=4878574 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_4
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

5084..5623
DNA (540bp) protein (180aa)
Conserved protein bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_5
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

5916..8390
DNA (2475bp) protein (825aa)
mrcA; penicillin-binding protein 1A (EC:2.4.2.- 3.4.-.-)
Penicillin-binding protein 1A bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_6
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

8444..11227
DNA (2784bp) protein (928aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_7
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

11344..11862
DNA (519bp) protein (173aa)
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase bin=GWC2_Nitrospirae-rel_56_14 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_8
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

12024..12824
DNA (801bp) protein (267aa)
Prolipoprotein diacylglyceryl transferase bin=GWC2_Nitrospirae-rel_56_14 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
prolipoprotein diacylglyceryl transferase
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_9
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

12886..13839
DNA (954bp) protein (318aa)
Pseudouridine synthase bin=GWC2_Nitrospirae-rel_56_14 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
RluA family pseudouridine synthase
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_10
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

13966..14937
DNA (972bp) protein (324aa)
NlpC/P60 family protein bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_11
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(15628..16695)
DNA (1068bp) protein (356aa)
Dual-specificity RNA methyltransferase RlmN bin=GWC2_Nitrospirae-rel_56_14 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
rlmN; ribosomal RNA large subunit methyltransferase N
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_12
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

16970..17236
DNA (267bp) protein (89aa)
D-tyrosyl-tRNA(Tyr) deacylase Tax=Clostridium sp. CAG:306 RepID=R6PLD9_9CLOT
D-tyrosyl-tRNA(Tyr) deacylase
Tax=GWC2_Nitrospirae_57_9_curated
PLM4_65_coex_sep16_scaffold_43_13
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

17233..18087
DNA (855bp) protein (285aa)
Alpha/beta hydrolase fold protein bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hydrolase
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_14
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

18264..18503
DNA (240bp) protein (80aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_15
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

18666..20318
DNA (1653bp) protein (551aa)
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_16
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

20432..22171
DNA (1740bp) protein (580aa)
ilvB; acetolactate synthase large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_17
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

22247..22720
DNA (474bp) protein (158aa)
ilvH; acetolactate synthase small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_18
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

22748..23377
DNA (630bp) protein (210aa)
id=4878533 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_19
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

23419..24435
DNA (1017bp) protein (339aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase bin=GWC2_Nitrospirae-rel_56_14 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_20
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

24572..25216
DNA (645bp) protein (215aa)
Phosphatidylserine decarboxylase proenzyme bin=GWC2_Nitrospirae-rel_56_14 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
phosphatidylserine decarboxylase
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_21
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

25213..25965
DNA (753bp) protein (251aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase bin=GWC2_Nitrospirae-rel_56_14 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_22
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

26101..27630
DNA (1530bp) protein (510aa)
leuA; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase bin=GWC2_Nitrospirae-rel_56_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_23
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

27668..28924
DNA (1257bp) protein (419aa)
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_24
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

29008..29505
DNA (498bp) protein (166aa)
3-isopropylmalate dehydratase small subunit bin=GWC2_Nitrospirae-rel_56_14 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
3-isopropylmalate dehydratase small subunit
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_25
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

29934..31010
DNA (1077bp) protein (359aa)
3-isopropylmalate dehydrogenase bin=GWC2_Nitrospirae-rel_56_14 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
isocitrate/isopropylmalate dehydrogenase
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_26
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

31063..32175
DNA (1113bp) protein (371aa)
Aspartate-semialdehyde dehydrogenase bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
aspartate-semialdehyde dehydrogenase
Tax=BJP_IG2158_Nitrospirales_45_240
PLM4_65_coex_sep16_scaffold_43_27
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

32265..33278
DNA (1014bp) protein (338aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_28
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

33357..34199
DNA (843bp) protein (281aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae-rel_56_14 species=Ferroglobus placidus genus=Ferroglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Cytochrome c family protein
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_29
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(34205..34444)
DNA (240bp) protein (80aa)
id=4878522 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_43_30
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

34620..34808
DNA (189bp) protein (63aa)
id=4878521 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
Displaying items 1-30 of 88 in total

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