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PLM4_65_coex_sep16_scaffold_572

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_572_1
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

3..317
DNA (315bp) protein (105aa)
Acetyl-coenzyme A synthetase bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
acetyl coenzyme A synthetase
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
PLM4_65_coex_sep16_scaffold_572_2
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

590..1855
DNA (1266bp) protein (422aa)
Sodium/proton antiporter, NhaD family bin=GWC2_Geobacteraceae_55_20 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
Na+/H+ antiporter
Tax=GWA2_Gallionellales_60_142_curated
PLM4_65_coex_sep16_scaffold_572_3
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

2232..3956
DNA (1725bp) protein (575aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae_57_13 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
transposase family protein
Tax=GWC2_Nitrospirae_57_13_curated
PLM4_65_coex_sep16_scaffold_572_4
RIFOXYD12_FULL_Planctomycetes_42_12_curated, Planctomycetes, Bacteria

Not on your lists

4066..5178
DNA (1113bp) protein (371aa)
M50 family peptidase (EC:3.4.24.-)
Uncharacterized protein Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5R0_9BACT
Tax=RIFOXYD12_FULL_Planctomycetes_42_12_curated
PLM4_65_coex_sep16_scaffold_572_5
unknown

Not on your lists

comp(5230..5520)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_572_6
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

5605..7863
DNA (2259bp) protein (753aa)
silP; protein SilP (EC:3.6.3.-)
Copper-transporting P-type ATPase bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=GWC2_Nitrospirae_57_13_curated
PLM4_65_coex_sep16_scaffold_572_7
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

8025..8312
DNA (288bp) protein (96aa)
Uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
cytochrome C class I
Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
PLM4_65_coex_sep16_scaffold_572_8
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

8678..9124
DNA (447bp) protein (149aa)
id=4607158 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_572_9
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

9239..10012
DNA (774bp) protein (258aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=GWC2_Nitrospirae_57_9_curated
PLM4_65_coex_sep16_scaffold_572_10
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10181..11497
DNA (1317bp) protein (439aa)
Na+/H+ antiporter Tax=planctomycete KSU-1 RepID=I3IQ99_9PLAN
Na+/H+ antiporter {ECO:0000313|EMBL:GAB63894.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
GerN
PLM4_65_coex_sep16_scaffold_572_11
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11691..12704
DNA (1014bp) protein (338aa)
Sodium/calcium exchanger membrane region bin=GWF2_Nitrospirae_44_13 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
sodium/calcium exchanger membrane region
Tax=GWC2_Deltaproteobacteria_42_11_curated
PLM4_65_coex_sep16_scaffold_572_12
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13031..13540
DNA (510bp) protein (170aa)
Putative uncharacterized protein bin=GWB2_Elusimicrobium_63_22 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
PLM4_65_coex_sep16_scaffold_572_13
unknown

Not on your lists

13537..13779
DNA (243bp) protein (81aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_572_14
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

13900..14724
DNA (825bp) protein (275aa)
Putative hydroxypyruvate reductase (Modular protein) Tax=mine drainage metagenome RepID=E6QVY3_9ZZZZ
mannosyl-3-phosphoglycerate phosphatase
Tax=GWC2_Nitrospirae_57_9_curated
PLM4_65_coex_sep16_scaffold_572_15
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

14802..15152
DNA (351bp) protein (117aa)
id=4690496 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=GWC2_Nitrospirae_57_9_curated
PLM4_65_coex_sep16_scaffold_572_16
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

15194..15445
DNA (252bp) protein (84aa)
Putative uncharacterized protein bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=Acaryochloris taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein
Tax=CG_Nitrosp_02
PLM4_65_coex_sep16_scaffold_572_17
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15541..16905
DNA (1365bp) protein (455aa)
glycerate kinase (EC:2.7.1.31)
Uncharacterized protein {ECO:0000313|EMBL:GAO37289.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Putative hydroxypyruvate reductase (Modular protein) bin=GWE2_Gallionellales_58_10 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
PLM4_65_coex_sep16_scaffold_572_18
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17201..18460
DNA (1260bp) protein (420aa)
putative glycosyl transferase, family 2 (EC:2.4.-.-)
Putative Glycosyl transferase, family 2 bin=GWE2_Gallionellales_58_10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=GWE2_Gallionellales_58_10_curated
PLM4_65_coex_sep16_scaffold_572_19
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18478..19182
DNA (705bp) protein (235aa)
Putative uncharacterized protein bin=GWE2_Gallionellales_58_10 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
PLM4_65_coex_sep16_scaffold_572_20
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19197..20405
DNA (1209bp) protein (403aa)
Uncharacterized protein bin=GWE2_Gallionellales_58_10 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
PLM4_65_coex_sep16_scaffold_572_21
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20682..21107
DNA (426bp) protein (142aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HF41_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27337.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_65_coex_sep16_scaffold_572_22
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

22193..24091
DNA (1899bp) protein (633aa)
Putative nucleotidyltransferase family bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
nucleotidyltransferase family protein
Tax=GWC2_Nitrospirae_57_9_curated
PLM4_65_coex_sep16_scaffold_572_23
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

24263..24958
DNA (696bp) protein (232aa)
Exonuclease RNase T and DNA polymerase III bin=GWC2_Nitrospirae_57_13 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
DNA polymerase III subuit alpha
Tax=GWC2_Nitrospirae_57_9_curated
Displaying 23 items

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