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PLM4_65_coex_sep16_scaffold_26

Search features with annotation key words

Displaying items 1-30 of 280 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_26_1
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..2441)
DNA (2439bp) protein (813aa)
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:ACK79040.1}; EC=3.6.3.2 {ECO:0000313|EMBL:ACK79040.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
magnesium-translocating P-type ATPase (EC:3.6.3.2)
hypothetical protein Tax=Thiobacillus denitrificans RepID=UPI0003615068
PLM4_65_coex_sep16_scaffold_26_2

Not on your lists

2465..3277
DNA (813bp) protein (271aa)
Uncharacterized protein Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q39ZY3_PELCD
Marine sediment metagenome DNA, contig: S03H2_C00306 {ECO:0000313|EMBL:GAH19386.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_26_3
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3282..4196)
DNA (915bp) protein (305aa)
Meso-diaminopimelate D-dehydrogenase-related protein Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A0T5_PELCD
meso-diaminopimelate D-dehydrogenase-related protein
Meso-diaminopimelate D-dehydrogenase-related protein {ECO:0000313|EMBL:ABA90022.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1).;"
PLM4_65_coex_sep16_scaffold_26_4
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(4196..5374)
DNA (1179bp) protein (393aa)
Type I phosphodiesterase/nucleotide pyrophosphatase Tax=Marichromatium purpuratum 984 RepID=F9U443_MARPU
phosphodiesterase
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_26_5
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(5430..6047)
DNA (618bp) protein (206aa)
Exopolysaccharide synthesis ExoD Tax=Chthoniobacter flavus Ellin428 RepID=B4DC42_9BACT
exopolysaccharide synthesis ExoD
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_26_6
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(6149..6838)
DNA (690bp) protein (230aa)
FKBP-type peptidyl-prolyl cis-trans isomerase; K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] bin=bin5_DeltaP species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
FKBP-type peptidylprolyl cis-trans isomerase
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_65_coex_sep16_scaffold_26_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

6973..7140
DNA (168bp) protein (56aa)
xthA; exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III {ECO:0000313|EMBL:CBK43995.1}; EC=3.1.11.2 {ECO:0000313|EMBL:CBK43995.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Exodeoxyribonuclease III Tax=Candidatus Nitrospira defluvii RepID=D8P913_9BACT
PLM4_65_coex_sep16_scaffold_26_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

7480..8658
DNA (1179bp) protein (393aa)
hypothetical protein bin=bin7_NC10_sister species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_26_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

8712..9848
DNA (1137bp) protein (379aa)
putative peptidase bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
putative peptidase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_26_10
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

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9943..10590
DNA (648bp) protein (216aa)
rnhC; ribonuclease HIII (fragment) (EC:3.1.26.4)
Ribonuclease Tax=Candidatus Nitrospira defluvii RepID=D8PBZ5_9BACT
Tax=RBG_13_Aminicenantes_62_12_curated
PLM4_65_coex_sep16_scaffold_26_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists

10691..11542
DNA (852bp) protein (284aa)
hypothetical protein bin=bin3_NC10 species=Frankia alni genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
ArsR family transcriptional regulator
Tax=CSP1_5_NC10
PLM4_65_coex_sep16_scaffold_26_12

Not on your lists

comp(11571..12185)
DNA (615bp) protein (205aa)
Uncharacterized protein Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7J8V2_METBM
Marine sediment metagenome DNA, contig: S03H2_L05268 {ECO:0000313|EMBL:GAH32166.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_26_13
unknown

Not on your lists

comp(12216..12656)
DNA (441bp) protein (147aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_26_14
unknown

Not on your lists

comp(12834..13244)
DNA (411bp) protein (137aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_26_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(13452..15191)
DNA (1740bp) protein (580aa)
msbA; lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:CBK43421.1}; EC=3.6.3.- {ECO:0000313|EMBL:CBK43421.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Lipid A export ATP-binding/permease protein MsbA Tax=Candidatus Nitrospira defluvii RepID=D8P7S5_9BACT
PLM4_65_coex_sep16_scaffold_26_16
unknown

Not on your lists

comp(15188..15490)
DNA (303bp) protein (101aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_26_17
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(15530..16456)
DNA (927bp) protein (309aa)
hypothetical protein Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0003642994
hypothetical protein
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
PLM4_65_coex_sep16_scaffold_26_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

16722..17852
DNA (1131bp) protein (377aa)
Beta-lactamase bin=GWD2_Deltaproteobacteria_55_8 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative esterase, beta-lactamase family
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM4_65_coex_sep16_scaffold_26_19
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(17798..18325)
DNA (528bp) protein (176aa)
Putative acetyltransferase Tax=Leptospirillum ferriphilum (strain ML-04) RepID=J9ZA20_LEPFM
transferase
Putative acetyltransferase {ECO:0000313|EMBL:AFS52592.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum (strain ML-04).;"
PLM4_65_coex_sep16_scaffold_26_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

18415..18951
DNA (537bp) protein (179aa)
putative HNH endonuclease (EC:3.1.-.-)
Putative HNH endonuclease {ECO:0000313|EMBL:CBK42472.1}; EC=3.1.-.- {ECO:0000313|EMBL:CBK42472.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative HNH endonuclease Tax=Candidatus Nitrospira defluvii RepID=D8PGT5_9BACT
PLM4_65_coex_sep16_scaffold_26_21
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

19105..19485
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8I0_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM4_65_coex_sep16_scaffold_26_22
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(19469..20104)
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PB74_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM4_65_coex_sep16_scaffold_26_23
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(20193..20540)
DNA (348bp) protein (116aa)
4Fe-4S ferredoxin Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC81
yfhL; 4Fe-4S ferredoxin
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM4_65_coex_sep16_scaffold_26_24
unknown

Not on your lists

comp(20662..20826)
DNA (165bp) protein (55aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_26_25
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(20837..21160)
DNA (324bp) protein (108aa)
Iron-sulfur cluster insertion protein ErpA Tax=Candidatus Nitrospira defluvii RepID=D8PJ05_9BACT
erpA2; iron-sulfur cluster insertion protein ErpA
Iron-sulfur cluster insertion protein ErpA {ECO:0000313|EMBL:CBK43242.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM4_65_coex_sep16_scaffold_26_26
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(21272..22576)
DNA (1305bp) protein (435aa)
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH-quinone oxidoreductase, subunit F Tax=Candidatus Nitrospira defluvii RepID=D8PJ07_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM4_65_coex_sep16_scaffold_26_27
R_Planctomycetes_38_41, Planctomycetes, Bacteria

Not on your lists

comp(22833..23771)
DNA (939bp) protein (313aa)
Malate dehydrogenase bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
malate dehydrogenase
Tax=RIFCSPHIGHO2_02_FULL_Planctomycetes_38_41_curated
PLM4_65_coex_sep16_scaffold_26_28
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(23891..24772)
DNA (882bp) protein (294aa)
sdhE; succinate dehydrogenase subunit C (EC:1.3.99.1)
Succinate dehydrogenase, subunit C Tax=Candidatus Nitrospira defluvii RepID=D8PG50_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM4_65_coex_sep16_scaffold_26_29
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(24769..25743)
DNA (975bp) protein (325aa)
sdhB; succinate dehydrogenase/fumarate reductase Fe-s protein subunit (EC:1.3.99.1)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit Tax=Candidatus Nitrospira defluvii RepID=D8PG40_9BACT
PLM4_65_coex_sep16_scaffold_26_30
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(25796..26218)
DNA (423bp) protein (141aa)
Acyl-CoA hydrolase Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VKX1_CLOSH
yciA; thioesterase superfamily protein YciA
Tax=RBG_16_RIF03_38_11_curated
Displaying items 1-30 of 280 in total

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