name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM4_65_coex_sep16_scaffold_1140_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria
|
Not on your lists |
comp(17..901)
|
peptidase S49, putative signal peptide peptidase SppA (EC:3.4.21.-)
Peptidase S49, putative signal peptide peptidase SppA {ECO:0000313|EMBL:CBK40204.1}; EC=3.4.21.- {ECO:0000313|EMBL:CBK40204.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Peptidase S49, putative signal peptide peptidase SppA Tax=Candidatus Nitrospira defluvii RepID=D8PAE5_9BACT
|
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PLM4_65_coex_sep16_scaffold_1140_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria
|
Not on your lists |
comp(947..2611)
|
30S ribosomal protein S1 Tax=Candidatus Nitrospira defluvii RepID=D8PAE4_9BACT
rpsA; 30S ribosomal protein S1
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
|
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PLM4_65_coex_sep16_scaffold_1140_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(2627..3289)
|
1-acyl-sn-glycerol-3-phosphate acyltransferases bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
1-acyl-sn-glycerol-3-phosphate acyltransferase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
|
|
PLM4_65_coex_sep16_scaffold_1140_4
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria
|
Not on your lists |
comp(3294..3980)
|
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase bin=GWC2_Nitrospirae-rel_56_14 species=Sulfobacillus acidophilus genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_57_9_curated
|
|
PLM4_65_coex_sep16_scaffold_1140_5
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(4036..5334)
|
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000255|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_00210}; Short=EPSP synthase {ECO:0000255|HAMAP-Rule:MF_00210};; Short=EPSPS {ECO:0000255|HAMAP-Rule:MF_00210};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
3-phosphoshikimate 1-carboxyvinyltransferase Tax=Geobacter metallireducens RepID=AROA_GEOMG
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase
|
|
PLM4_65_coex_sep16_scaffold_1140_6
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5331..6155)
|
Prephenate dehydrogenase bin=GWC2_Deltaproteobacteria_55_46 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
tyrA; prephenate dehydrogenase
Tax=GWC2_Deltaproteobacteria_55_46b_curated
|
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PLM4_65_coex_sep16_scaffold_1140_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria
|
Not on your lists |
comp(6199..7215)
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aroF; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
|
|
PLM4_65_coex_sep16_scaffold_1140_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria
|
Not on your lists |
comp(7286..8383)
|
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:CBK40197.1}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:CBK40197.1};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Histidinol-phosphate aminotransferase Tax=Candidatus Nitrospira defluvii RepID=D8PAD8_9BACT
|
|
PLM4_65_coex_sep16_scaffold_1140_9
R_Nitrospirae_66_17, Nitrospirae, Bacteria
|
Not on your lists |
comp(8391..9461)
|
pheA; p-protein, bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5)
P-protein, bifunctional chorismate mutase/prephenate dehydratase Tax=Candidatus Nitrospira defluvii RepID=D8PAD7_9BACT
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
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PLM4_65_coex_sep16_scaffold_1140_10
R_NC10_66_22, NC10, Bacteria
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Not on your lists |
comp(9649..9981)
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XRE family transcriptional regulator bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
XRE family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
|
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PLM4_65_coex_sep16_scaffold_1140_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria
|
Not on your lists |
comp(9984..10313)
|
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PGE6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42333.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
|
|
PLM4_65_coex_sep16_scaffold_1140_12
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10400..11086)
|
Putative transcriptional regulator with HTH domain Tax=Caulobacter sp. AP07 RepID=J2PWP5_9CAUL
Putative transcriptional regulator with HTH domain {ECO:0000313|EMBL:EJL32207.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
|
|
PLM4_65_coex_sep16_scaffold_1140_13
unknown
|
Not on your lists |
comp(11107..11232)
|
This feature has no annotations |
|
PLM4_65_coex_sep16_scaffold_1140_14
unknown
|
Not on your lists |
comp(11177..12019)
|
This feature has no annotations |
|
PLM4_65_coex_sep16_scaffold_1140_15
Idiomarina salinarum, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12271..13464)
|
Uncharacterized protein Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7RC53_KANKD
Uncharacterized protein {ECO:0000313|EMBL:KFZ32129.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina salinarum.;"
hypothetical protein
|
|
PLM4_65_coex_sep16_scaffold_1140_16
R_Acidobacteria_61_28, Acidobacteria, Bacteria
|
Not on your lists |
comp(13863..14135)
|
Uncharacterized protein Tax=Cyanothece sp. (strain PCC 8802) RepID=C7QQU6_CYAP0
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
|
|
PLM4_65_coex_sep16_scaffold_1140_17
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria
|
Not on your lists |
comp(14104..14388)
|
hypothetical protein
Putative uncharacterized protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
|
|
PLM4_65_coex_sep16_scaffold_1140_18
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14527..15591)
|
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
Holliday junction ATP-dependent DNA helicase RuvB Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMR9_SIDLE
ATP-dependent DNA helicase RuvB
|
|
PLM4_65_coex_sep16_scaffold_1140_19
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria
|
Not on your lists |
comp(15588..16199)
|
ruvA; holliday junction DNA helicase RuvA (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvA bin=GWC2_Syntrophus__56_31 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
|
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PLM4_65_coex_sep16_scaffold_1140_20
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16196..16714)
|
Crossover junction endodeoxyribonuclease ruvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC bin=GWD2_Nitrospirae-related_57_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
|
|
PLM4_65_coex_sep16_scaffold_1140_21
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria
|
Not on your lists |
comp(16800..17552)
|
Probable transcriptional regulatory protein THEYE_A1868 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=RBG_16_Nitrospirae_64_22_curated
|
|
PLM4_65_coex_sep16_scaffold_1140_22
GWA2_OP3_52_12_curated, Omnitrophica, Bacteria
|
Not on your lists |
comp(17515..19197)
|
Oxidoreductase FAD/NAD(P)-binding protein bin=GWA2_OP3_52_12 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
oxidoreductase FAD-binding subunit
Tax=GWA2_OP3_52_12_curated
|
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PLM4_65_coex_sep16_scaffold_1140_23
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria
|
Not on your lists |
comp(19366..21039)
|
Putative Cytochrome c (Modular protein) Tax=Candidatus Nitrospira defluvii RepID=D8PI95_9BACT
putative cytochrome c
Putative Cytochrome c (Modular protein) {ECO:0000313|EMBL:CBK42982.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
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PLM4_65_coex_sep16_scaffold_1140_24
R_Nitrospirae_66_17, Nitrospirae, Bacteria
|
Not on your lists |
comp(21104..22021)
|
membrane protein Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AF74
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
|
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PLM4_65_coex_sep16_scaffold_1140_25
R_Nitrospirae_66_17, Nitrospirae, Bacteria
|
Not on your lists |
comp(22072..23391)
|
nitric oxide reductase Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AF73
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
|
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PLM4_65_coex_sep16_scaffold_1140_26
R_Nitrospirae_66_17, Nitrospirae, Bacteria
|
Not on your lists |
comp(23460..23624)
|
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
|