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PLM4_65_coex_sep16_scaffold_1337

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1337_1
unknown

Not on your lists

comp(2..106)
DNA (105bp) protein (35aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1337_2
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(177..1226)
DNA (1050bp) protein (350aa)
NHL repeat protein bin=GWC2_NOV_55_46 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_NOV_55_46 organism_group=Proteobacteria
NHL repeat protein
Tax=RBG_16_Nitrospirae_64_22_curated
PLM4_65_coex_sep16_scaffold_1337_3
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

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comp(1415..2221)
DNA (807bp) protein (269aa)
Cytochrome c bin=GWB2_Geobacter-like_52_12 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
cytochrome C
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
PLM4_65_coex_sep16_scaffold_1337_4
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

2782..3114
DNA (333bp) protein (111aa)
Putative uncharacterized protein bin=GWB2_Proteobacteria_55_19 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
PLM4_65_coex_sep16_scaffold_1337_5
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

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3116..3733
DNA (618bp) protein (206aa)
Cytochrome c5 bin=GWC2_Deltaproteobacteria_56_8 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
cytochrome c, class I
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
PLM4_65_coex_sep16_scaffold_1337_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3770..5071)
DNA (1302bp) protein (434aa)
udg; UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase Tax=Candidatus Nitrospira defluvii RepID=D8P8I1_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM4_65_coex_sep16_scaffold_1337_7
Pteria penguin, Pteria, Pterioida, Pteriomorphia, Mollusca, Metazoa

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comp(5278..7104)
DNA (1827bp) protein (609aa)
Shell matrix protein Tax=Pteria penguin RepID=G9MBX1_PTEPN
Shell matrix protein {ECO:0000313|EMBL:BAL21568.1}; species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Pterioida; Pterioidea; Pteriidae; Pteria.;" source="Pteria penguin (Winged pearl oyster) (Magnavicula penguin).;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_1337_8
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

7334..8032
DNA (699bp) protein (233aa)
Ribosomal RNA small subunit methyltransferase I bin=GWD2_Nitrospirae-related_57_8 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
Tax=RBG_16_Nitrospirae_64_22_curated
PLM4_65_coex_sep16_scaffold_1337_9
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8055..9377)
DNA (1323bp) protein (441aa)
Diguanylate cyclase bin=GWC2_Deltaproteobacteria_42_51 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
GGDEF domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
PLM4_65_coex_sep16_scaffold_1337_10
unknown

Not on your lists

9440..9730
DNA (291bp) protein (97aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1337_11
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

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9859..10602
DNA (744bp) protein (248aa)
Putative Phosphoribosyltransferase bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
competence protein ComF
Tax=GWC2_Nitrospirae_57_9_curated
PLM4_65_coex_sep16_scaffold_1337_12
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

10787..10984
DNA (198bp) protein (66aa)
FmdB family regulatory protein bin=RBG_16_Aminicenantes_66_30 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
FmdB family regulatory protein
Tax=RBG_16_Aminicenantes_66_30_curated
PLM4_65_coex_sep16_scaffold_1337_13
unknown

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10981..11253
DNA (273bp) protein (91aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1337_14
CSP1_5_NC10, NC10, Bacteria

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11275..11952
DNA (678bp) protein (226aa)
glycosyl transferase family 2 protein (EC:2.4.1.-) bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
glycosyl transferase family 2 protein (EC:2.4.1.-)
Tax=CSP1_5_NC10
PLM4_65_coex_sep16_scaffold_1337_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

11936..12655
DNA (720bp) protein (240aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJX6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67559.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_1337_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12703..15114)
DNA (2412bp) protein (804aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Primosomal protein N' (ATP-dependent helicase priA) (Replication factor Y) (EC:3.6.1.-) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
primosomal protein N'
PLM4_65_coex_sep16_scaffold_1337_17
unknown

Not on your lists

15261..15947
DNA (687bp) protein (229aa)

This feature has no annotations

Displaying 17 items

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