ggKbase home page

PLM4_65_coex_sep16_scaffold_23_11

Organism: PLM4_65_coex_sep16_Nitrospirae_63_31

near complete RP 46 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 8215..8763

Top 3 Functional Annotations

Value Algorithm Source
Fimbrial assembly family protein bin=GWC2_Nitrospirae_57_13 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 similarity UNIREF
DB: UNIREF100
  • Identity: 41.3
  • Coverage: 179.0
  • Bit_score: 132
  • Evalue 2.30e-28
putative type IV pilus biogenesis protein PilN similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 185.0
  • Bit_score: 131
  • Evalue 1.90e-28
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 182.0
  • Bit_score: 288
  • Evalue 6.00e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Nitrospirae_66_17 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 549
ATGATCAAGATCAATCTCCTCGGCGGAGGCCGTCCCAAACGCGCGCATAAGTCCACTGAGGTTCCGTATCAGACGGTGGGGGTTGTAGGAGTGGTTCTCCTGTTGGTCGTGGGCATGGGATATGCGTGGTGGTACTTGTCGGACCGGGTTCAAGCCATGACGACGCAAACCGTCACGCTAACGAAGGACTTGGCGGCGCTTAAAGTGAAAGTCAAGGAAGTGGAGGATTACGAAAAGAACAAGAAAAACTTGGAGGAGAAAATCGGCATCATTGAGCAGTTACGGAAGAACCAAAGCGGCCCCGTTCACCTGTTGGAGGAGATTAGCCGCAGTCTGCCCGATCGCGTCTGGCTCACTTCGCTGACCGAACAGGGCGGGAAAATCGATCTCGAAGGAAAGGCCGTGACGAATGCCGAGATCGTGGATTTCATCAATAACCTGAAAACCTCACGGTACATATCCGAGATCCAGCTGATCGAATCCCGGCAGACCGCCGAAGGGGGGATTCCTGTGTACAACTTCAAACTGAAGTGCACGATGGTGCTCTGA
PROTEIN sequence
Length: 183
MIKINLLGGGRPKRAHKSTEVPYQTVGVVGVVLLLVVGMGYAWWYLSDRVQAMTTQTVTLTKDLAALKVKVKEVEDYEKNKKNLEEKIGIIEQLRKNQSGPVHLLEEISRSLPDRVWLTSLTEQGGKIDLEGKAVTNAEIVDFINNLKTSRYISEIQLIESRQTAEGGIPVYNFKLKCTMVL*