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PLM4_65_coex_sep16_scaffold_153

Search features with annotation key words

Displaying items 1-30 of 174 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_153_16S_1
unknown

Not on your lists

2..742
DNA (741bp)
16S ribosomal RNA (16S rRNA)
PLM4_65_coex_sep16_scaffold_153_1
GWB1_OP11_44_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

1186..1473
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT35785.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWB1_44_11c.;"
id=1897385 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
PLM4_65_coex_sep16_scaffold_153_2
R_OD1_Yanofskybacteria_44_88, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

1470..2039
DNA (570bp) protein (190aa)
Putative uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_44_88_curated
PLM4_65_coex_sep16_scaffold_153_3
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(2086..2874)
DNA (789bp) protein (263aa)
Putative uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
PLM4_65_coex_sep16_scaffold_153_4
R_RIF_OD1_07_45_25, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

2927..3448
DNA (522bp) protein (174aa)
tRNA/rRNA methyltransferase Tax=uncultured candidate division OP1 bacterium RepID=H5SF64_9BACT
rRNA methylase
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_45_25_curated
PLM4_65_coex_sep16_scaffold_153_5
unknown

Not on your lists

comp(3445..3675)
DNA (231bp) protein (77aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_153_6
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

3750..4391
DNA (642bp) protein (214aa)
Ribonuclease H (EC:3.1.26.4)
Ribonuclease HII bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
PLM4_65_coex_sep16_scaffold_153_7
R_OD1_Yanofskybacteria_41_21, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

4399..5448
DNA (1050bp) protein (350aa)
Glyceraldehyde-3-phosphate dehydrogenase, type I bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
glyceraldehyde 3-phosphate dehydrogenase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_41_21_curated
PLM4_65_coex_sep16_scaffold_153_8
R_OD1_Azambacteria_44_14, Azambacteria, Parcubacteria, Bacteria

Not on your lists

5630..6493
DNA (864bp) protein (288aa)
Transketolase domain protein bin=GWC2_OD1_43_27 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Transketolase protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Azambacteria_44_14_curated
PLM4_65_coex_sep16_scaffold_153_9
R_OD1_Yanofskybacteria_47_9b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

6498..8786
DNA (2289bp) protein (763aa)
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_47_9b_curated
PLM4_65_coex_sep16_scaffold_153_10
R_OP11_Gottesmanbacteria_39_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

8804..9769
DNA (966bp) protein (322aa)
YD repeat-containing protein bin=OD1_GWC2_34_28 species=Synechococcus phage S-PM2 genus=T4likevirus taxon_order=Caudovirales taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
YD repeat-containing protein
Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_39_11_curated
PLM4_65_coex_sep16_scaffold_153_11
R_OD1_45_26, Parcubacteria, Bacteria

Not on your lists

9773..10816
DNA (1044bp) protein (348aa)
Glycoside hydrolase family 9 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_01_FULL_OD1_45_26_curated
PLM4_65_coex_sep16_scaffold_153_12
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

10890..11822
DNA (933bp) protein (311aa)
Putative transketolase C-terminal section (TK) bin=GWC2_OD1_43_27 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
transketolase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
PLM4_65_coex_sep16_scaffold_153_13
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(11864..12415)
DNA (552bp) protein (184aa)
phage spo1 DNA polymerase-related protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
PLM4_65_coex_sep16_scaffold_153_trna_1
unknown

Not on your lists

12541..12612
DNA (72bp)
transferRNA Ile
PLM4_65_coex_sep16_scaffold_153_14
GWE2_OD1_40_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

12555..13721
DNA (1167bp) protein (389aa)
Putative DNA recombination protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKR39771.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWE2_40_11.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_153_trna_2
unknown

Not on your lists

12624..12696
DNA (73bp)
transferRNA Ala
PLM4_65_coex_sep16_scaffold_153_15
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

13796..14503
DNA (708bp) protein (236aa)
IMP dehydrogenase Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZA2_THERP
IMP dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
PLM4_65_coex_sep16_scaffold_153_16
GWE2_OD1_40_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

14585..15268
DNA (684bp) protein (228aa)
CmpX protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
CmpX protein {ECO:0000313|EMBL:KKR39769.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWE2_40_11.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_153_17
GWE1_OD1_40_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(15352..15942)
DNA (591bp) protein (197aa)
pth; peptidyl-tRNA hydrolase Pth (EC:3.1.1.29)
Peptidyl-tRNA hydrolase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:KKR36226.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWE1_40_10.;"
PLM4_65_coex_sep16_scaffold_153_18
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

16110..16700
DNA (591bp) protein (197aa)
Putative signal peptidase I bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
putative signal peptidase I
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
PLM4_65_coex_sep16_scaffold_153_19
R_OD1_Yanofskybacteria_41_34, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists


16687..17997
DNA (1311bp) protein (437aa)
Histidine--tRNA ligase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
histidyl-tRNA synthetase
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_41_34_curated
PLM4_65_coex_sep16_scaffold_153_20
R_OD1_Yanofskybacteria_43_32, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

18149..18493
DNA (345bp) protein (115aa)
Histidine triad domain protein Tax=Clostridium sp. CAG:343 RepID=R6N2S0_9CLOT
HIT family hydrolase, diadenosine tetraphosphate hydrolase
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_32_curated
PLM4_65_coex_sep16_scaffold_153_21
GWC1_OD1_39_29_partial, Parcubacteria, Bacteria

Not on your lists

18653..18919
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2EQU3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR14821.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_29.;"
PLM4_65_coex_sep16_scaffold_153_22
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

19050..19547
DNA (498bp) protein (166aa)
GatB/YqeY protein Tax=uncultured bacterium RepID=K2B9E5_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
PLM4_65_coex_sep16_scaffold_153_23
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

19549..19986
DNA (438bp) protein (146aa)
Endoribonuclease YbeY Tax=Sulfurihydrogenibium sp. (strain YO3AOP1) RepID=YBEY_SULSY
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
PLM4_65_coex_sep16_scaffold_153_24
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

20010..21251
DNA (1242bp) protein (414aa)
Cell division protein ftsA bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
cell division protein FtsA
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
PLM4_65_coex_sep16_scaffold_153_25
GWA2_OD1_44_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

21362..22513
DNA (1152bp) protein (384aa)
Cell division protein FtsZ {ECO:0000313|EMBL:KKT28410.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_10.;"
Cell division protein FtsZ bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
cell division protein FtsZ, nonfunctional
PLM4_65_coex_sep16_scaffold_153_26
R_RIF_OD1_10_46_25, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

22709..23230
DNA (522bp) protein (174aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_10_46_25_curated
PLM4_65_coex_sep16_scaffold_153_27
GWA1_OD1_39_13_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

23653..26502
DNA (2850bp) protein (950aa)
vitamin B12-dependent ribonucleotide reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:KKR02384.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_39_13.;"
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Displaying items 1-30 of 174 in total

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