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PLM4_65_coex_sep16_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_22_1
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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361..1242
DNA (882bp) protein (294aa)
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase bin=GWF2_Planctomycete_41_51 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_22_2
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

1353..2534
DNA (1182bp) protein (394aa)
acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase bin=GWF2_Planctomycete_41_51 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_22_3
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

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2602..2967
DNA (366bp) protein (122aa)
hypothetical protein bin=bin1_lowGC species=Rhodopirellula baltica genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_22_4
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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3477..4388
DNA (912bp) protein (304aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase bin=GWF2_Planctomycetes_50_10 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_22_5

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4525..4845
DNA (321bp) protein (107aa)
Marine sediment metagenome DNA, contig: S03H2_S02253 {ECO:0000313|EMBL:GAH59383.1}; Marine sediment metagenome DNA, contig: S12H4_L02980 {ECO:0000313|EMBL:GAI74519.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative 10 kDa chaperonin bin=GWF2_Planctomycetes_42_9 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
groS; putative 10 kDa chaperonin
PLM4_65_coex_sep16_scaffold_22_6
unknown

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4917..5087
DNA (171bp) protein (57aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_22_7
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(5227..6180)
DNA (954bp) protein (318aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-604-O16 RepID=UPI000367EC61
AAA family ATPase
Tax=CG_Anaero_01
PLM4_65_coex_sep16_scaffold_22_8
Gallaecimonas xiamenensis, Gallaecimonas, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6666..7043
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=Gallaecimonas xiamenensis 3-C-1 RepID=K2JSG7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EKE77452.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Gallaecimonas.;" source="Gallaecimonas xiamenensis 3-C-1.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_22_9
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

7139..7405
DNA (267bp) protein (89aa)
seg 118..134 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
hypothetical protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_65_coex_sep16_scaffold_22_10
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(7497..8069)
DNA (573bp) protein (191aa)
Cell wall/surface repeat protein bin=GWF2_Planctomycetes_50_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_22_11
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(8377..9609)
DNA (1233bp) protein (411aa)
Aminotransferase bin=GWC2_Planctomycetes_45_44 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
aspartate/tyrosine/aromatic aminotransferase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_22_12
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

9899..11533
DNA (1635bp) protein (545aa)
S-layer domain-containing protein bin=GWF2_Planctomycete_41_51 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
filamentous hemagglutinin family outer membrane protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_22_13
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(11583..13055)
DNA (1473bp) protein (491aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5-monophosphate dehydrogenase bin=GWC2_Planctomycetes_45_44 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_22_14
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists


13170..13808
DNA (639bp) protein (213aa)
nucleoside-triphosphatase (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase bin=GWF2_Planctomycete_41_51 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_22_15
Sulfurovum sp. FS06-10, Sulfurovum, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13895..14134)
DNA (240bp) protein (80aa)
Uncharacterized protein Tax=Clostridium sordellii VPI 9048 RepID=T0CQ19_CLOSO
Uncharacterized protein {ECO:0000313|EMBL:KIM07029.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Sulfurovum.;" source="Sulfurovum sp. FS06-10.;"
hypothetical protein DUF2442
PLM4_65_coex_sep16_scaffold_22_16
Geobacter sp. M21, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14145..14411)
DNA (267bp) protein (89aa)
Uncharacterized protein Tax=Geobacter sp. (strain M21) RepID=C6E2D3_GEOSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT17079.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M21).;"
PLM4_65_coex_sep16_scaffold_22_17
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

14757..17129
DNA (2373bp) protein (791aa)
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I bin=GWC2_Planctomycetes_45_44 species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_22_18
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

17623..20004
DNA (2382bp) protein (794aa)
Cell divisionFtsK/SpoIIIE bin=GWF2_Planctomycetes_50_10 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
ftsK; putative DNA translocase FtsK
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_22_19
unknown

Not on your lists

comp(19971..20198)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_22_20
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

20200..21252
DNA (1053bp) protein (351aa)
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Probable dual-specificity RNA methyltransferase RlmN bin=GWF2_Planctomycetes_50_10 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_22_21
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

21249..22199
DNA (951bp) protein (317aa)
1-phosphofructokinase bin=GWF2_Planctomycetes_42_9 species=Halanaerobium saccharolyticum genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
1-phosphofructokinase
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_22_22
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(22491..23474)
DNA (984bp) protein (328aa)
deoxycytidylate deaminase-related protein bin=GWF2_Planctomycetes_50_10 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
CMP/dCMP deaminase zinc-binding protein
Tax=GWF2_Planctomycetes_50_10_curated
PLM4_65_coex_sep16_scaffold_22_23
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

24051..25202
DNA (1152bp) protein (384aa)
Putative uncharacterized protein Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SH89_PLABD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY60630.1}; Flags: Precursor;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
PLM4_65_coex_sep16_scaffold_22_trna_1
unknown

Not on your lists

25693..25764
DNA (72bp)
transferRNA Gln
PLM4_65_coex_sep16_scaffold_22_24
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

25893..27041
DNA (1149bp) protein (383aa)
Bifunctional protein GlmU bin=GWF2_Planctomycetes_50_10 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
N-acetylglucosamine-1-phosphate uridylyltransferase/acetyltransferase
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_22_25
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

27028..27981
DNA (954bp) protein (318aa)
prs; phosphoribosyl pyrophosphate synthase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase bin=GWF2_Planctomycete_41_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_22_26
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists


27996..28640
DNA (645bp) protein (215aa)
50S ribosomal protein L25 bin=GWC2_Planctomycetes_45_44 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_22_27
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

28667..29242
DNA (576bp) protein (192aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase bin=GWF2_Planctomycetes_50_10 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_22_28
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


29347..29829
DNA (483bp) protein (161aa)
30S ribosomal protein S6 bin=GWF2_Planctomycetes_50_10 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
30S ribosomal protein S6
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_22_29
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

29851..30279
DNA (429bp) protein (143aa)
Single-stranded DNA-binding protein bin=GWF2_Planctomycetes_42_9 species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
single-strand binding protein
Tax=RBG_16_Planctomycetes_55_9_curated
Displaying items 1-30 of 107 in total

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