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PLM4_65_coex_sep16_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_72_1
Colwellia psychrerythraea, Colwellia, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

215..1360
DNA (1146bp) protein (382aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-133-C04 RepID=UPI00036B9A90
Nucleotide-binding protein, TIR-like protein {ECO:0000313|EMBL:KGJ95188.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Colwellia.;" source="Colwellia psychrerythraea (Vibrio psychroerythus).;"
Hypothetical protein
PLM4_65_coex_sep16_scaffold_72_2
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1606..2466
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=Acinetobacter baumannii RepID=B0V6K3_ACIBY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGJ64087.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter baumannii 6013113.;"
PLM4_65_coex_sep16_scaffold_72_3
unknown

Not on your lists

2807..2917
DNA (111bp) protein (37aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_72_4
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

2969..4222
DNA (1254bp) protein (418aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00036A45F8
oxidoreductase domain-containing protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_65_coex_sep16_scaffold_72_5
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

4294..6573
DNA (2280bp) protein (760aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XM57_9BACT
hypothetical protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_65_coex_sep16_scaffold_72_6
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

6599..7477
DNA (879bp) protein (293aa)
diaminopimelate epimerase bin=GWF2_Planctomycetes_50_10 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
diaminopimelate epimerase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_72_7
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(7481..7834)
DNA (354bp) protein (118aa)
id=3694648 bin=GWF2_Planctomycetes_50_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_72_8
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

8236..9366
DNA (1131bp) protein (377aa)
Sensory box histidine kinase bin=GWC2_Planctomycetes_45_44 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
multi-sensor signal transduction histidine kinase
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_72_9
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

9394..10779
DNA (1386bp) protein (462aa)
sigma-54 factor interaction domain-containing protein bin=GWF2_Planctomycetes_50_10 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Fis family transcriptionel regulator
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_72_10
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(11080..12234)
DNA (1155bp) protein (385aa)
Putative uncharacterized protein bin=GWC2_Bacteroidetes_40_13 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_72_11
unknown

Not on your lists

comp(12673..13353)
DNA (681bp) protein (227aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_72_trna_2
unknown

Not on your lists

comp(13909..13992)
DNA (84bp)
transferRNA Leu
PLM4_65_coex_sep16_scaffold_72_12
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

14244..14633
DNA (390bp) protein (130aa)
Uncharacterized consrved protein, containing Zn finger bin=GWC2_Planctomycetes_45_44 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_72_13

Not on your lists

14637..15500
DNA (864bp) protein (288aa)
Putative uncharacterized protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LPK3_SYNFM
Marine sediment metagenome DNA, contig: S01H1_S03370 {ECO:0000313|EMBL:GAF91203.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_72_14
RBG_16_Deltaproteobacteria_44_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15497..15904
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C214_NITHN
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_44_11_curated
PLM4_65_coex_sep16_scaffold_72_15
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(16067..16747)
DNA (681bp) protein (227aa)
7-carboxy-7-deazaguanine synthase bin=GWF2_Planctomycetes_50_10 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
radical SAM domain-containing protein
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_72_16
unknown

Not on your lists

comp(16744..16848)
DNA (105bp) protein (35aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_72_17
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(16845..17552)
DNA (708bp) protein (236aa)
7-cyano-7-deazaguanine synthase bin=GWF2_Planctomycetes_50_10 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
7-cyano-7-deazaguanine synthase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_72_18
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

17887..18246
DNA (360bp) protein (120aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase bin=GWC2_Planctomycetes_45_44 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
7-cyano-7-deazaguanine reductase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_72_19
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

18272..18775
DNA (504bp) protein (168aa)
id=2802701 bin=GWF2_Planctomycetes_50_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_72_20
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

18983..20749
DNA (1767bp) protein (589aa)
Putative uncharacterized protein bin=GWF2_Planctomycetes_50_10 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_72_21
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

20861..21475
DNA (615bp) protein (205aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase bin=GWF2_Planctomycete_41_51 species=Planctomyces maris genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_72_22
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

21677..23212
DNA (1536bp) protein (512aa)
Transcription termination factor Rho bin=GWF2_Planctomycetes_42_9 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
transcription termination factor Rho
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_72_23
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists


23373..27215
DNA (3843bp) protein (1281aa)
Valine--tRNA ligase Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CFS9_KOSOT
valyl-tRNA synthetase
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_72_24
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

27255..27650
DNA (396bp) protein (132aa)
Uncharacterized protein bin=GWF2_Planctomycete_41_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_72_25
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(27607..28185)
DNA (579bp) protein (193aa)
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase bin=GWF2_Planctomycete_41_51 species=unknown genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_72_26
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

28448..30022
DNA (1575bp) protein (525aa)
phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI bin=GWF2_Planctomycetes_50_10 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_72_27
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

30441..32183
DNA (1743bp) protein (581aa)
DNA mismatch repair protein MutL bin=GWF2_Planctomycetes_42_9 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
mutL; DNA mismatch repair protein MutL
Tax=RBG_13_Planctomycetes_44_8b_curated
PLM4_65_coex_sep16_scaffold_72_28
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

32183..33079
DNA (897bp) protein (299aa)
Periplasmic binding protein bin=GWF2_Planctomycetes_50_10 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
cobalamide ABC transporter substrate-binding protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_72_29
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

33084..34115
DNA (1032bp) protein (344aa)
Vitamin B12 import system, permease protein BtuC bin=GWF2_Planctomycetes_50_10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
transport system permease
Tax=RBG_13_Planctomycetes_62_9_curated
Displaying items 1-30 of 72 in total

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