ggKbase home page

PLM4_65_coex_sep16_scaffold_73

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_73_1

Not on your lists

453..2828
DNA (2376bp) protein (792aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL45908.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Glycosyl hydrolase family 38 N-terminal domain protein bin=GWF2_Planctomycetes_50_10 species=Alistipes sp. HGB5 genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
PLM4_65_coex_sep16_scaffold_73_2
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

3370..6231
DNA (2862bp) protein (954aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003734B16
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_65_coex_sep16_scaffold_73_3
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

6247..7644
DNA (1398bp) protein (466aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000361B3BC
beta-xylosidase
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM4_65_coex_sep16_scaffold_73_4
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

7705..9795
DNA (2091bp) protein (697aa)
WD domain-/G-beta repeat-containing protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_73_5
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

9839..10330
DNA (492bp) protein (164aa)
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_73_6
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

10337..11773
DNA (1437bp) protein (479aa)
Uncharacterized protein (Fragment) Tax=uncultured bacterium RepID=K1Z8W2_9BACT
putative alginate O-acetyltransferase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_73_7
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

11918..12925
DNA (1008bp) protein (336aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XQT4_SORCE
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_73_8
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(14358..15623)
DNA (1266bp) protein (422aa)
DNA methyltransferase Tax=Burkholderia pseudomallei RepID=UPI00016B1A32
DNA methyltransferase
Tax=BJP_IG2069_Spirochaetales_48_31
PLM4_65_coex_sep16_scaffold_73_9
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(15641..16582)
DNA (942bp) protein (314aa)
Uncharacterized protein Tax=Rhodopirellula baltica WH47 RepID=F2AZG4_RHOBT
hypothetical protein
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_73_10
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(16589..17689)
DNA (1101bp) protein (367aa)
Uncharacterized protein Tax=Rhodopirellula baltica WH47 RepID=F2AZG5_RHOBT
hypothetical protein
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_73_11
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(18436..20169)
DNA (1734bp) protein (578aa)
Phosphoenolpyruvate-protein phosphotransferase bin=GWF2_Planctomycetes_50_10 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
phosphoenolpyruvate-protein phosphotransferase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_73_12
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(20213..20521)
DNA (309bp) protein (103aa)
Phosphotransferase system, phosphocarrier protein HPr bin=GWF2_Planctomycetes_50_10 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
fruB; phosphotransferase system HPr-related protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_65_coex_sep16_scaffold_73_13
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(20564..21037)
DNA (474bp) protein (158aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 bin=GWF2_Planctomycetes_50_10 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_73_14
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(21109..21429)
DNA (321bp) protein (107aa)
Sigma-54 modulation protein bin=GWF2_Planctomycetes_50_10 species=unknown genus=Francisella taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
ribosomal subunit interface protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_73_15
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(21483..22319)
DNA (837bp) protein (279aa)
Uncharacterized protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IAV8_PHYMF
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_73_16
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(22416..23462)
DNA (1047bp) protein (349aa)
Putative uncharacterized protein bin=GWF2_Planctomycetes_42_9 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
membrane protein
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_73_17
unknown

Not on your lists

23470..23616
DNA (147bp) protein (49aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_73_18
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

24032..24589
DNA (558bp) protein (186aa)
ORF6N domain-containing protein bin=GWF2_Planctomycetes_42_9 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
hypothetical protein
Tax=GWF2_Planctomycetes_42_9_curated
PLM4_65_coex_sep16_scaffold_73_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

24872..26044
DNA (1173bp) protein (391aa)
Uncharacterized protein Tax=Thioflavicoccus mobilis 8321 RepID=L0H2N5_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_65_coex_sep16_scaffold_73_20
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

26663..27715
DNA (1053bp) protein (351aa)
BNR/Asp-box repeat protein bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
BNR/Asp-box repeat-containing protein
Tax=CG_Ignavi_02
PLM4_65_coex_sep16_scaffold_73_21
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

28333..30186
DNA (1854bp) protein (618aa)
hypothetical protein Tax=Flexithrix dorotheae RepID=UPI0003802D94
hypothetical protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_65_coex_sep16_scaffold_73_22
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

30639..33377
DNA (2739bp) protein (913aa)
hypothetical protein Tax=Prochlorothrix hollandica RepID=UPI0003477D79
Uncharacterized protein {ECO:0000313|EMBL:KIF32034.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_73_23
BJP_IG2158_Nitrospirales_45_240, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

33338..33874
DNA (537bp) protein (179aa)
Uncharacterized protein Tax=Anabaena sp. 90 RepID=K7WNL7_9NOST
hypothetical protein
Tax=BJP_IG2158_Nitrospirales_45_240
PLM4_65_coex_sep16_scaffold_73_24
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

34378..35703
DNA (1326bp) protein (442aa)
RNA polymerase alpha subunit domain protein bin=GWF2_Planctomycetes_50_10 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
DNA-directed RNA polymerase subunit alpha
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_73_25
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

35960..37114
DNA (1155bp) protein (385aa)
Uncharacterized protein bin=GWC2_Planctomycetes_45_44 species=Dactylococcopsis salina genus=Dactylococcopsis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
SpoIID/LytB domain-containing protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_73_26
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

37256..37546
DNA (291bp) protein (97aa)
hypothetical protein Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI00037FA2F3
DNA polymerase beta domain-containing protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_73_27
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

37543..37881
DNA (339bp) protein (113aa)
Putative uncharacterized protein Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KN04_ARCVS
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_73_28
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

37905..39074
DNA (1170bp) protein (390aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase bin=GWF2_Planctomycetes_50_10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_73_29
Smithella sp. SC_K08D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39262..39822
DNA (561bp) protein (187aa)
Uncharacterized protein Tax=Vibrio parahaemolyticus 3259 RepID=T5GMQ7_VIBPH
Uncharacterized protein {ECO:0000313|EMBL:KIE18399.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SC_K08D17.;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_73_30
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

40731..41138
DNA (408bp) protein (136aa)
Preprotein translocase, YajC subunit bin=GWF2_Planctomycetes_42_9 species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
preprotein translocase, yajc subunit
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
Displaying items 1-30 of 117 in total

View Taxonomy