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PLM4_65_coex_sep16_scaffold_358

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_358_1
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(335..1666)
DNA (1332bp) protein (444aa)
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_358_2
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(1663..2199)
DNA (537bp) protein (179aa)
Sigma-70 family RNA polymerase sigma factor bin=GWF2_Planctomycetes_50_10 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_358_3
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(2360..3283)
DNA (924bp) protein (308aa)
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_358_4
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(3572..3826)
DNA (255bp) protein (85aa)
hypothetical protein Tax=Latescibacteria bacterium SCGC AAA252-D10 RepID=UPI00037F07FA
ECF family RNA polymerase sigma-70 factor
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_358_5
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(3990..5324)
DNA (1335bp) protein (445aa)
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_358_6
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(5329..5838)
DNA (510bp) protein (170aa)
hypothetical protein Tax=Nocardioides sp. Iso805N RepID=UPI00036B6B5E
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_358_7
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(6177..7289)
DNA (1113bp) protein (371aa)
Arabinose efflux permease family protein bin=GWC2_Proteo_65_14_Ab886 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
fosmidmycin resistance protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_358_8
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(7386..8279)
DNA (894bp) protein (298aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase bin=GWF2_Planctomycete_41_51 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
phosphoribosylaminoimidazole-succinocarboxamide synthase
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_358_9
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(8389..9099)
DNA (711bp) protein (237aa)
Putative uncharacterized protein bin=GWC2_Planctomycetes_45_44 species=Flavobacterium johnsoniae genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hypothetical protein
Tax=GWC2_Planctomycetes_45_44_curated
PLM4_65_coex_sep16_scaffold_358_10
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

9248..9592
DNA (345bp) protein (115aa)
Uncharacterized protein MJ1618 bin=GWC2_Planctomycetes_45_44 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_358_11
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

10164..11030
DNA (867bp) protein (289aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000364BB5D
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_358_12
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

11128..11937
DNA (810bp) protein (270aa)
Putative uncharacterized protein bin=GWF2_Planctomycete_41_51 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
prepilin-type N-terminal cleavage/methylation domain
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_358_13
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

12021..12269
DNA (249bp) protein (83aa)
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_358_14
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(12378..12575)
DNA (198bp) protein (66aa)
id=4484873 bin=GWF2_Planctomycetes_50_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_358_15

Not on your lists

12752..13984
DNA (1233bp) protein (411aa)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI00037D15B1
Marine sediment metagenome DNA, contig: S01H1_L07830 {ECO:0000313|EMBL:GAF77690.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
queA; S-adenosylmethionine tRNA ribosyltransferase-isomerase QueA
PLM4_65_coex_sep16_scaffold_358_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14072..15811)
DNA (1740bp) protein (580aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XMM2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58921.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_65_coex_sep16_scaffold_358_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(15812..16573)
DNA (762bp) protein (254aa)
ABC transporter related-protein Tax=Pedosphaera parvula Ellin514 RepID=B9XMM1_9BACT
ABC transporter related-protein {ECO:0000313|EMBL:EEF58920.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
multidrug ABC transporter ATPase
PLM4_65_coex_sep16_scaffold_358_18
unknown

Not on your lists

16633..17028
DNA (396bp) protein (132aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_358_19
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(16831..18054)
DNA (1224bp) protein (408aa)
Acyltransferase 3 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4E0_9CHLR
Acyltransferase 3
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_358_20
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(18084..19730)
DNA (1647bp) protein (549aa)
arylsulfatase Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B57EB5
sulfatase
Tax=CG_Arma_01
PLM4_65_coex_sep16_scaffold_358_21
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(19745..20875)
DNA (1131bp) protein (377aa)
xylose isomerase Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B3BD2C
xylose isomerase domain-containing protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_358_22
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(20882..22378)
DNA (1497bp) protein (499aa)
carbohydrate kinase Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B710AC
carbohydrate kinase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_358_23
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(22497..23900)
DNA (1404bp) protein (468aa)
sgsA4; N-sulfoglucosamine sulfohydrolase (EC:3.10.1.1)
Heparan N-sulfatase Tax=Blastopirellula marina DSM 3645 RepID=A3ZZ72_9PLAN
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_358_24
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(23993..28537)
DNA (4545bp) protein (1515aa)
Glutaminase A Tax=Rhodopirellula sp. SWK7 RepID=M5TSZ3_9PLAN
glutaminase
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
PLM4_65_coex_sep16_scaffold_358_25
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(28870..29949)
DNA (1080bp) protein (360aa)
Uncharacterized protein bin=GWF2_Planctomycetes_50_10 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_358_26
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(29970..30533)
DNA (564bp) protein (188aa)
5-formyltetrahydrofolate cyclo-ligase bin=GWF2_Planctomycetes_50_10 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
5-formyltetrahydrofolate cyclo-ligase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_358_27
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(30534..31958)
DNA (1425bp) protein (475aa)
Uncharacterized protein bin=GWF2_Planctomycete_41_51 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
AAA ATPase
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_358_28
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

32205..32501
DNA (297bp) protein (99aa)
id=3863337 bin=GWC2_Planctomycetes_45_44 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Tax=RBG_16_Planctomycetes_55_9_curated
Displaying 28 items

View Taxonomy