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PLM4_65_coex_sep16_scaffold_449

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_449_1
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(2..298)
DNA (297bp) protein (99aa)
id=3863337 bin=GWC2_Planctomycetes_45_44 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_449_2
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(396..1787)
DNA (1392bp) protein (464aa)
trpB; tryptophan synthase subunit beta TrpB (EC:4.2.1.20)
Tryptophan synthase beta chain bin=GWC2_Planctomycetes_45_44 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_449_3
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

2231..2425
DNA (195bp) protein (65aa)
id=3120044 bin=GWC2_Planctomycetes_45_44 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_449_4
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

2698..3663
DNA (966bp) protein (322aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase bin=GWF2_Planctomycetes_50_10 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_449_5
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

3682..4686
DNA (1005bp) protein (335aa)
Segregation and condensation protein A bin=GWF2_Planctomycetes_50_10 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
chromosome segregation and condensation protein ScpA
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_449_6
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

5062..5556
DNA (495bp) protein (165aa)
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_449_7
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

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5571..6080
DNA (510bp) protein (170aa)
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_65_coex_sep16_scaffold_449_8
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

6122..7429
DNA (1308bp) protein (436aa)
id=3029581 bin=GWF2_Planctomycetes_50_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_449_9
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

7695..8186
DNA (492bp) protein (164aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
NADH dehydrogenase subunit E Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RG97_DESPD
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_449_10
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

8183..10168
DNA (1986bp) protein (662aa)
NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CYU7_PELTS
NuoF; NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit
Tax=RBG_13_Chloroflexi_53_26_curated
PLM4_65_coex_sep16_scaffold_449_11
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10188..12674
DNA (2487bp) protein (829aa)
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain protein Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RG99_DESPD
dihydroorotate dehydrogenase electron transfer subunit
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
PLM4_65_coex_sep16_scaffold_449_12
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12695..14104
DNA (1410bp) protein (470aa)
glutamate synthase (NADPH) (EC:1.4.1.13)
Glutamate synthase bin=GWC2_Deltaproteobacteria_42_51 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
PLM4_65_coex_sep16_scaffold_449_13
GWC2_Planctomycetes_45_44_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

14222..14773
DNA (552bp) protein (184aa)
Putative uncharacterized protein bin=GWC2_Planctomycetes_45_44 species=Calothrix parietina genus=Calothrix taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
hypothetical protein
Tax=GWC2_Planctomycetes_45_44_curated
PLM4_65_coex_sep16_scaffold_449_14
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

15215..16525
DNA (1311bp) protein (437aa)
Putative uncharacterized protein bin=GWF2_Planctomycete_41_51 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_449_15
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

16546..17634
DNA (1089bp) protein (363aa)
alanine--glyoxylate transaminase (EC:2.6.1.44)
Alanine--glyoxylate transaminase bin=GWF2_Planctomycete_41_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_65_coex_sep16_scaffold_449_16
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(18129..19760)
DNA (1632bp) protein (544aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IK59_9PLAN
hypothetical protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_65_coex_sep16_scaffold_449_17
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

20281..20691
DNA (411bp) protein (137aa)
Response regulator receiver protein bin=GWF2_Planctomycete_41_51 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
response regulator receiver protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_449_18
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

20810..21100
DNA (291bp) protein (97aa)
co-chaperonin bin=GWC2_Planctomycetes_45_44 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
groES; co-chaperonin GroES
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_449_19
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

21144..22772
DNA (1629bp) protein (543aa)
60 kDa chaperonin bin=GWC2_Planctomycetes_45_44 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
groL; 60 kDa chaperonin
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_449_20

Not on your lists

22868..23158
DNA (291bp) protein (97aa)
Marine sediment metagenome DNA, contig: S06H3_S17657 {ECO:0000313|EMBL:GAI32736.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=4344484 bin=GWC2_Planctomycetes_45_44 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
PLM4_65_coex_sep16_scaffold_449_21
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(23235..24374)
DNA (1140bp) protein (380aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase bin=GWF2_Planctomycete_41_51 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_65_coex_sep16_scaffold_449_22
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(24383..25813)
DNA (1431bp) protein (477aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase bin=GWF2_Planctomycetes_50_10 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
MurF; UDP-N-acetylmuramyl pentapeptide synthase
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_449_23
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

26080..26292
DNA (213bp) protein (71aa)
Uncharacterized protein Tax=Bacteria RepID=H0P513_9SYNC
slr1999; hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_449_24
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

26516..27163
DNA (648bp) protein (216aa)
Putative uncharacterized protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
PLM4_65_coex_sep16_scaffold_449_25

Not on your lists

comp(27167..27796)
DNA (630bp) protein (210aa)
Transposase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0F9_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KKL48218.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transposase
PLM4_65_coex_sep16_scaffold_449_26
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(27838..28290)
DNA (453bp) protein (151aa)
hypothetical protein Tax=Methylobacterium sp. WSM2598 RepID=UPI000377AEB2
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_65_coex_sep16_scaffold_449_27
unknown

Not on your lists

comp(28978..29061)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 27 items

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