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PLM4_65_coex_sep16_scaffold_1909

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1909_1
R_NC10_66_22, NC10, Bacteria

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292..441
DNA (150bp) protein (50aa)
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 bin=bin3_NC10 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin3_NC10 organism_group=NC10
50S ribosomal protein L33
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_1909_trna_1
unknown

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532..604
DNA (73bp)
transferRNA Trp
PLM4_65_coex_sep16_scaffold_1909_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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780..983
DNA (204bp) protein (68aa)
Protein translocase subunit SecE Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK19_9BACT
secE; preprotein translocase subunit secE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_1909_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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993..1544
DNA (552bp) protein (184aa)
Transcription termination/antitermination protein NusG Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK20_9BACT
nusG; component in transcription antitermination
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_1909_4
R_NC10_66_22, NC10, Bacteria

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1680..2102
DNA (423bp) protein (141aa)
50S ribosomal protein L11 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK21_9BACT
rplK; 50S ribosomal protein L11
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_1909_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2214..2921
DNA (708bp) protein (236aa)
50S ribosomal protein L1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK22_9BACT
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_1909_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2955..3494
DNA (540bp) protein (180aa)
50S ribosomal protein L10 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK23_9BACT
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_1909_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3552..3944
DNA (393bp) protein (131aa)
50S ribosomal protein L7/L12 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK24_9BACT
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_1909_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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3972..7988
DNA (4017bp) protein (1339aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:CBE67608.1};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
rpoB; RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK25_9BACT
PLM4_65_coex_sep16_scaffold_1909_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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8080..12174
DNA (4095bp) protein (1365aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:CBE67609.1};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK26_9BACT
PLM4_65_coex_sep16_scaffold_1909_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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12247..12624
DNA (378bp) protein (126aa)
30S ribosomal protein S12 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK27_9BACT
rpsL; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_1909_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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12729..15287
DNA (2559bp) protein (853aa)
Elongation factor G Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK29_9BACT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
fusA; elongation factor G
PLM4_65_coex_sep16_scaffold_1909_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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15322..15459
DNA (138bp) protein (46aa)
Elongation factor Tu Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK17_9BACT
tufB; Elongation factor Tu (EF-Tu)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Displaying 13 items

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