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PLM4_65_coex_sep16_scaffold_5356

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_5356_1
RBG_16_NC10_65_8_curated, NC10, Bacteria

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3..215
DNA (213bp) protein (71aa)
PilI Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08YZ0_STIAD
pilI; efflux ABC transporter permease PilI
Tax=RBG_16_NC10_65_8_curated
PLM4_65_coex_sep16_scaffold_5356_2
R_NC10_66_22, NC10, Bacteria

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212..883
DNA (672bp) protein (224aa)
hypothetical protein bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_5356_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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831..1658
DNA (828bp) protein (276aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Type 4 prepilin-like proteins leader peptide-processing enzyme Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMF2_9BACT
type 4 prepilin-like proteins leader peptide processing enzyme
PLM4_65_coex_sep16_scaffold_5356_4
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

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1698..3557
DNA (1860bp) protein (620aa)
PAS domain S-box protein (EC:2.7.13.3)
Signal transduction histidine kinase, nitrogen specific, NtrB bin=GWC2_Nitrospirae_57_13 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=GWA2_Nitrospirae_42_11_curated
PLM4_65_coex_sep16_scaffold_5356_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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3570..4979
DNA (1410bp) protein (470aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Nitrospirae_57_13 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
AtoC; response regulator
Tax=RBG_16_Nitrospirae_64_22_curated
PLM4_65_coex_sep16_scaffold_5356_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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5312..7012
DNA (1701bp) protein (567aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMF1_9BACT
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CBE70073.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_5356_7
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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7020..8057
DNA (1038bp) protein (346aa)
Putative Glycosyl transferase, group 1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMF0_9BACT
Glycosyl transferase, group 1
Putative Glycosyl transferase, group 1 {ECO:0000313|EMBL:CBE70072.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_5356_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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8058..8954
DNA (897bp) protein (299aa)
Tyrosine recombinase XerD Tax=Candidatus Methylomirabilis oxyfera RepID=D5MME9_9BACT
xerD; tyrosine recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_5356_9
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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9035..10318
DNA (1284bp) protein (428aa)
tRNA cytidylyltransferase (EC:2.7.7.72)
Putative tRNA cytidylyltransferase {ECO:0000313|EMBL:CBE69918.1}; EC=2.7.7.21 {ECO:0000313|EMBL:CBE69918.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative tRNA cytidylyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML76_9BACT
PLM4_65_coex_sep16_scaffold_5356_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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10388..11029
DNA (642bp) protein (214aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML77_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69919.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_5356_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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11054..12040
DNA (987bp) protein (329aa)
trpS; tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) {ECO:0000313|EMBL:CBE69920.1}; EC=6.1.1.2 {ECO:0000313|EMBL:CBE69920.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML78_9BACT
PLM4_65_coex_sep16_scaffold_5356_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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12327..13790
DNA (1464bp) protein (488aa)
guaB; inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH) (IMPD) (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Inosine-5'-monophosphate dehydrogenase Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML79_9BACT
PLM4_65_coex_sep16_scaffold_5356_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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14074..14328
DNA (255bp) protein (85aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
GMP synthase [glutamine-hydrolyzing] Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML81_9BACT
Displaying 13 items

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