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PLM4_65_coex_sep16_scaffold_3608

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3608_trna_1
unknown

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comp(6..76)
DNA (71bp)
transferRNA Gln
PLM4_65_coex_sep16_scaffold_3608_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(339..842)
DNA (504bp) protein (168aa)
Transcription elongation factor greA (Transcript cleavage factor greA) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFS8_9BACT
greA; transcription elongation factor greA (Transcript cleavage factor greA)
Transcription elongation factor greA (Transcript cleavage factor greA) {ECO:0000313|EMBL:CBE68609.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_3608_2
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(839..2308)
DNA (1470bp) protein (490aa)
gltX; glutamyl-tRNA synthetase (Glutamate--tRNA ligase) (GluRS) (EC:6.1.1.17)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000313|EMBL:CBE68610.1};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Glutamate--tRNA ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFS9_9BACT
PLM4_65_coex_sep16_scaffold_3608_3
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(2305..2487)
DNA (183bp) protein (61aa)
UPF0434 protein DAMO_1551 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFT0_9BACT
hypothetical protein
UPF0434 protein DAMO_1551 {ECO:0000256|HAMAP-Rule:MF_01187}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_3608_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(2973..3446)
DNA (474bp) protein (158aa)
Ribosomal-protein-alanine acetyltransferase, RimI-like protein (EC:2.3.1.128)
Putative Ribosomal-protein-alanine acetyltransferase, RimI-like protein {ECO:0000313|EMBL:CBE68612.1}; EC=2.3.1.128 {ECO:0000313|EMBL:CBE68612.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Putative Ribosomal-protein-alanine acetyltransferase, RimI-like protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFT1_9BACT
PLM4_65_coex_sep16_scaffold_3608_5
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3463..4167)
DNA (705bp) protein (235aa)
Peptidase M22, glycoprotease Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFT2_9BACT
peptidase M22, glycoprotease
Peptidase M22, glycoprotease {ECO:0000313|EMBL:CBE68613.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_3608_6
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(4277..5500)
DNA (1224bp) protein (408aa)
Major facilitator superfamily MFS_1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFT3_9BACT
Major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CBE68614.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_65_coex_sep16_scaffold_3608_7
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5625..6602)
DNA (978bp) protein (326aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
Ketopantoate reductase ApbA/PanE Tax=Novosphingobium sp. PP1Y RepID=F6IH20_9SPHN
ketopantoate reductase ApbA/PanE
PLM4_65_coex_sep16_scaffold_3608_8
R_NC10_66_22, NC10, Bacteria

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comp(6677..7501)
DNA (825bp) protein (275aa)
transport-associated protein bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
transport-associated protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3608_9
R_NC10_66_22, NC10, Bacteria

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comp(7634..9052)
DNA (1419bp) protein (473aa)
serine protease; K01362 [EC:3.4.21.-] bin=bin3_NC10 species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
protease Do (EC:3.4.21.107)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_3608_10
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(9079..9342)
DNA (264bp) protein (88aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFT4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68615.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Displaying 11 items

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