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PLM4_65_coex_sep16_scaffold_1001

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1001_1
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..133
DNA (132bp) protein (44aa)
hypothetical protein Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI000369A29C
Uncharacterized protein {ECO:0000313|EMBL:CDI04703.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
transposase
PLM4_65_coex_sep16_scaffold_1001_2
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(384..1097)
DNA (714bp) protein (238aa)
FAD-binding protein Tax=Sphingomonas melonis RepID=UPI000361E570
FAD-binding protein {ECO:0000313|EMBL:KJC53602.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
FAD linked oxidase domain-containing protein
PLM4_65_coex_sep16_scaffold_1001_3
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1099..1965)
DNA (867bp) protein (289aa)
UPI0003CDF641 related cluster Tax=unknown RepID=UPI0003CDF641
FAD-binding protein {ECO:0000313|EMBL:KJC53602.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
FAD linked oxidase domain-containing protein
PLM4_65_coex_sep16_scaffold_1001_4
unknown

Not on your lists

2298..2462
DNA (165bp) protein (55aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1001_5
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

2757..3206
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0W0_CALAS
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
PLM4_65_coex_sep16_scaffold_1001_6
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

3257..3883
DNA (627bp) protein (209aa)
Transposase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0F9_9CHLR
transposase
Tax=RBG_16_Chloroflexi_57_11_curated
PLM4_65_coex_sep16_scaffold_1001_7
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

4008..4253
DNA (246bp) protein (82aa)
Tax=CG_Anaero_01
PLM4_65_coex_sep16_scaffold_1001_8
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

4237..4656
DNA (420bp) protein (140aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003731635
PilT protein domain-containing protein
Tax=CG_Anaero_01
PLM4_65_coex_sep16_scaffold_1001_9
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

4906..5286
DNA (381bp) protein (127aa)
Transcriptional regulator, AraC type Tax=Plesiocystis pacifica SIR-1 RepID=A6GAG6_9DELT bin=RBG9 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG9 organism_group=Chloroflexi
transcription activator, effector binding
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM4_65_coex_sep16_scaffold_1001_10
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

5292..5690
DNA (399bp) protein (133aa)
Lactoylglutathione lyase-like lyase Tax=Mycobacterium chubuense NBB4 RepID=I4BKD0_9MYCO bin=RBG9 species=Mycobacterium chubuense genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG9 organism_group=Chloroflexi
lactoylglutathione lyase-like lyase
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM4_65_coex_sep16_scaffold_1001_11
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(5828..7276)
DNA (1449bp) protein (483aa)
nuoN; NADH-quinone oxidoreductase subunit N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N bin=GWB2_Chloroflexi_49_20 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RBG_16_Chloroflexi_51_16_curated
PLM4_65_coex_sep16_scaffold_1001_12
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(7342..8853)
DNA (1512bp) protein (504aa)
nuoM; NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
NADH dehydrogenase I subunit M bin=GWB2_Chloroflexi_49_20 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RBG_16_Chloroflexi_51_16_curated
PLM4_65_coex_sep16_scaffold_1001_13
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(8904..11051)
DNA (2148bp) protein (716aa)
nuoL; NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
NADH dehydrogenase I subunit L Tax=uncultured Chloroflexi bacterium RepID=H5S8Q9_9CHLR
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
PLM4_65_coex_sep16_scaffold_1001_14
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(11184..11504)
DNA (321bp) protein (107aa)
NADH-quinone oxidoreductase subunit K bin=GWD2_Chloroflexi_49_16 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
NADH-ubiquinone oxidoreductase, chain 4L
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
PLM4_65_coex_sep16_scaffold_1001_15
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(11504..12067)
DNA (564bp) protein (188aa)
nuoJ; NADH-quinone oxidoreductase subunit J (EC:1.6.99.5)
NADH dehydrogenase I subunit J bin=GWB2_Chloroflexi_49_20 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=GWC2_Chloroflexi_49_37_curated
PLM4_65_coex_sep16_scaffold_1001_16
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(12112..12630)
DNA (519bp) protein (173aa)
nuoI; NADH-quinone oxidoreductase subunit I (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit I bin=GWB2_Chloroflexi_49_20 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=CG_Anaero_04
PLM4_65_coex_sep16_scaffold_1001_17
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(12617..13792)
DNA (1176bp) protein (392aa)
nuoH; NADH-quinone oxidoreductase subunit H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H bin=GWB2_Chloroflexi_49_20 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=CG_Anaero_04
PLM4_65_coex_sep16_scaffold_1001_18
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(13792..16239)
DNA (2448bp) protein (816aa)
nuoG; NADH-quinone oxidoreductase subunit G (EC:1.6.99.5)
NADH-quinone oxidoreductase chain G bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RBG_16_Chloroflexi_51_16_curated
PLM4_65_coex_sep16_scaffold_1001_19
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(16249..17502)
DNA (1254bp) protein (418aa)
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH dehydrogenase I subunit F bin=GWB2_Chloroflexi_49_20 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RBG_16_Chloroflexi_51_16_curated
PLM4_65_coex_sep16_scaffold_1001_20
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(17502..18008)
DNA (507bp) protein (169aa)
nuoE; NADH-quinone oxidoreductase subunit E (EC:1.6.99.5)
NADH-quinone oxidoreductase chain E bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
PLM4_65_coex_sep16_scaffold_1001_21
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(18005..19234)
DNA (1230bp) protein (410aa)
nuoD; NADH-quinone oxidoreductase subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D Tax=uncultured Chloroflexi bacterium RepID=H5S8R7_9CHLR
Tax=RBG_16_Chloroflexi_51_16_curated
PLM4_65_coex_sep16_scaffold_1001_22
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(19237..19671)
DNA (435bp) protein (145aa)
nuoC; NADH-quinone oxidoreductase subunit C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C Tax=uncultured Chloroflexi bacterium RepID=H5S8R8_9CHLR
Tax=RBG_16_Chloroflexi_51_16_curated
PLM4_65_coex_sep16_scaffold_1001_23
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(19658..20146)
DNA (489bp) protein (163aa)
nuoB; NADH-quinone oxidoreductase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B Tax=uncultured Chloroflexi bacterium RepID=H5SL28_9CHLR
Tax=RBG_16_Chloroflexi_57_11_curated
PLM4_65_coex_sep16_scaffold_1001_24
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(20137..20505)
DNA (369bp) protein (123aa)
nuoA; NADH-quinone oxidoreductase subunit A (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit A bin=GWC2_Chloroflexi_49_37 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Tax=RBG_16_Chloroflexi_51_16_curated
PLM4_65_coex_sep16_scaffold_1001_25
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(20702..22234)
DNA (1533bp) protein (511aa)
RNA polymerase sigma factor bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
RNA polymerase sigma factor
Tax=CG_Anaero_04
PLM4_65_coex_sep16_scaffold_1001_26
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(22374..24305)
DNA (1932bp) protein (644aa)
dnaG; DNA primase (EC:2.7.7.-)
DNA primase Tax=uncultured Chloroflexi bacterium RepID=H5SL31_9CHLR
Tax=BJP_IG2157_Anaerolineales_55_23
PLM4_65_coex_sep16_scaffold_1001_27
unknown

Not on your lists

comp(24411..24809)
DNA (399bp) protein (133aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1001_28
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(24976..25767)
DNA (792bp) protein (264aa)
Uncharacterized protein Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K1C6_DEHLB
hypothetical protein
Tax=RBG_16_Chloroflexi_51_16_curated
PLM4_65_coex_sep16_scaffold_1001_29
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(25764..26285)
DNA (522bp) protein (174aa)
RNA polymerase ECF-type sigma factor Tax=Symbiobacterium thermophilum RepID=Q67LD3_SYMTH bin=RBG2 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG2 organism_group=Chloroflexi
ECF subfamily RNA polymerase sigma-24 factor
Tax=RBG_16_Chloroflexi_51_16_curated
PLM4_65_coex_sep16_scaffold_1001_30
unknown

Not on your lists

comp(26652..26900)
DNA (249bp) protein (83aa)

This feature has no annotations

Displaying items 1-30 of 34 in total

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