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PLM4_65_coex_sep16_scaffold_1728

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1728_1
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

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comp(2..1180)
DNA (1179bp) protein (393aa)
Benzoyl-CoA reductase electron transfer protein, putative Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E7T2_GEOBB
bamH; benzoyl-CoA reductase electron transfer protein
Tax=RBG_16_Chloroflexi_48_8_curated
PLM4_65_coex_sep16_scaffold_1728_2

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comp(1177..1653)
DNA (477bp) protein (159aa)
[Fe] hydrogenase, HymA subunit Tax=Dehalococcoides mccartyi RepID=D2BHH7_DEHSV
Marine sediment metagenome DNA, contig: S01H1_S01066 {ECO:0000313|EMBL:GAF94970.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hydrogenase
PLM4_65_coex_sep16_scaffold_1728_3
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(1878..2624)
DNA (747bp) protein (249aa)
Two component transcriptional regulator, winged helix family Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C556_SPHTD bin=RBG9 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
two component transcriptional regulator, winged helix family
Tax=RBG_16_Chloroflexi_57_11_curated
PLM4_65_coex_sep16_scaffold_1728_4
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

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comp(2634..3962)
DNA (1329bp) protein (443aa)
histidine kinase (EC:2.7.13.3) bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
histidine kinase (EC:2.7.13.3)
Tax=RBG_16_Chloroflexi_54_11_curated
PLM4_65_coex_sep16_scaffold_1728_5
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

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4176..4925
DNA (750bp) protein (250aa)
pseudouridine synthase (EC:4.2.1.70)
Pseudouridine synthase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N441_ANATU
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
PLM4_65_coex_sep16_scaffold_1728_6
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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4951..5475
DNA (525bp) protein (175aa)
tpx; thiol peroxidase (EC:1.11.1.-)
Thiol peroxidase Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N5Z1_ANATU
Tax=CG_Anaero_04
PLM4_65_coex_sep16_scaffold_1728_7
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(5550..6191)
DNA (642bp) protein (214aa)
Putative signal transduction protein with CBS domains bin=GWB2_Chloroflexi_49_20 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
hypothetical protein
Tax=CG_Anaero_04
PLM4_65_coex_sep16_scaffold_1728_8
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

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comp(6338..7048)
DNA (711bp) protein (237aa)
Branched-chain amino acid transport system ATP-binding protein Tax=uncultured Chloroflexi bacterium RepID=H5SBF4_9CHLR
hypothetical protein
Tax=CG_Anaero_01
PLM4_65_coex_sep16_scaffold_1728_9
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(7051..7806)
DNA (756bp) protein (252aa)
Branched-chain amino acid transport system ATP-binding protein Tax=uncultured Chloroflexi bacterium RepID=H5SBF5_9CHLR
hypothetical protein
Tax=CG_Anaero_04
PLM4_65_coex_sep16_scaffold_1728_10
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

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comp(7803..8774)
DNA (972bp) protein (324aa)
Branched-chain amino acid transport system permease protein Tax=uncultured Chloroflexi bacterium RepID=H5SBF6_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_54_11_curated
PLM4_65_coex_sep16_scaffold_1728_11
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(8771..9637)
DNA (867bp) protein (289aa)
Branched-chain amino acid transport system permease protein Tax=uncultured Chloroflexi bacterium RepID=H5SBF7_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
PLM4_65_coex_sep16_scaffold_1728_12
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(9703..11049)
DNA (1347bp) protein (449aa)
Branched-chain amino acid transport system substrate-binding protein Tax=uncultured Chloroflexi bacterium RepID=H5SBF8_9CHLR
hypothetical protein
Tax=RBG_16_Chloroflexi_54_18_curated
PLM4_65_coex_sep16_scaffold_1728_13
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(11183..11869)
DNA (687bp) protein (229aa)
Two component transcriptional regulator, winged helix family Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4T3_9CHLR
two component transcriptional regulator
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
PLM4_65_coex_sep16_scaffold_1728_14
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(11869..13950)
DNA (2082bp) protein (694aa)
Multi-sensor signal transduction histidine kinase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4T2_9CHLR
multi-sensor signal transduction histidine kinase
Tax=CG_Anaero_04
PLM4_65_coex_sep16_scaffold_1728_15
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(14442..15800)
DNA (1359bp) protein (453aa)
Peptidase M20 family protein bin=GWC2_Chloroflexi_49_37 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
peptidase M20 family protein
Tax=BJP_IG2157_Anaerolineales_55_23
PLM4_65_coex_sep16_scaffold_1728_16
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(15956..16309)
DNA (354bp) protein (118aa)
Hypothetical membrane protein bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hypothetical protein
Tax=CG_Anaero_04
PLM4_65_coex_sep16_scaffold_1728_17
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(16461..16973)
DNA (513bp) protein (171aa)
Peptidyl-prolyl cis-trans isomerase B bin=GWD2_Chloroflexi_49_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
Tax=BJP_IG2157_Anaerolineales_55_23
PLM4_65_coex_sep16_scaffold_1728_18
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

comp(17019..17642)
DNA (624bp) protein (208aa)
udk; uridine kinase (EC:2.7.1.48)
Uridine kinase bin=GWD2_Chloroflexi_49_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_Chloroflexi_49_37_curated
PLM4_65_coex_sep16_scaffold_1728_19
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(17676..18215)
DNA (540bp) protein (180aa)
Thioredoxin domain protein Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G8B9_CHLAD
thioredoxin domain-containing protein
Tax=BJP_IG2157_Anaerolineales_55_23
PLM4_65_coex_sep16_scaffold_1728_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18242..18442)
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAR9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99249.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM4_65_coex_sep16_scaffold_1728_21
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(18660..19061)
DNA (402bp) protein (134aa)
Putative uncharacterized protein bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
hypothetical protein
Tax=CG_Anaero_04
Displaying 21 items

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