ggKbase home page

PLM4_65_coex_sep16_scaffold_6224

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_6224_1
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

2..94
DNA (93bp) protein (31aa)
Transposase IS4 family protein Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQQ0_ROSCS
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ABU59896.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM4_65_coex_sep16_scaffold_6224_2

Not on your lists

295..744
DNA (450bp) protein (150aa)
Marine sediment metagenome DNA, contig: S01H4_S13491 {ECO:0000313|EMBL:GAG91558.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Cyclic nucleotide-binding protein bin=GWD2_Chloroflexi_49_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
cyclic nucleotide-binding protein
PLM4_65_coex_sep16_scaffold_6224_3
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

861..2153
DNA (1293bp) protein (431aa)
Cyclic nucleotide-binding protein bin=GWD2_Chloroflexi_49_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
cyclic nucleotide-binding protein
Tax=RBG_16_Chloroflexi_57_11_curated
PLM4_65_coex_sep16_scaffold_6224_4
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

2150..4564
DNA (2415bp) protein (805aa)
Putative ABC transporter permease protein bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
protein of unknown function DUF214
Tax=RBG_16_Chloroflexi_57_11_curated
PLM4_65_coex_sep16_scaffold_6224_5
unknown

Not on your lists

4929..5246
DNA (318bp) protein (106aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_6224_6
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

5746..6702
DNA (957bp) protein (319aa)
ABC transporter substrate binding protein bin=GWB2_Chloroflexi_49_20 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
ABC transporter substrate binding protein
Tax=GWC2_Chloroflexi_49_37_curated
PLM4_65_coex_sep16_scaffold_6224_7
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

6763..7308
DNA (546bp) protein (182aa)
ABC transporter ATP-binding protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N073_ANATU
ABC transporter ATP-binding protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
PLM4_65_coex_sep16_scaffold_6224_8
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

7293..7505
DNA (213bp) protein (71aa)
ABC transporter ATP-binding protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N073_ANATU
ABC transporter ATP-binding protein
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
PLM4_65_coex_sep16_scaffold_6224_9
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

7492..8232
DNA (741bp) protein (247aa)
atm:ANT_03730 ABC transporter permease; K02050 NitT/TauT family transport system permease protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
ABC transporter permease
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
PLM4_65_coex_sep16_scaffold_6224_10
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8225..9130)
DNA (906bp) protein (302aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1).;"
1,4-dihydroxy-2-naphtoate prenyltransferase Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J882_DESRM
1,4-dihydroxy-2-naphthoate octaprenyltransferase
PLM4_65_coex_sep16_scaffold_6224_11
RIFOXYC12_FULL_Chloroflexi_59_14_curated, Chloroflexi, Bacteria

Not on your lists

9192..9902
DNA (711bp) protein (237aa)
ubiE; menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Demethylmenaquinone methyltransferase bin=GWC2_Chloroflexi_49_37 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation
Tax=RIFOXYC12_FULL_Chloroflexi_59_14_curated
PLM4_65_coex_sep16_scaffold_6224_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

10604..12397
DNA (1794bp) protein (598aa)
major facilitator superfamily protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
major facilitator superfamily protein
Tax=RBG_16_Chloroflexi_63_12_curated
Displaying 12 items

View Taxonomy