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PLM4_65_coex_sep16_scaffold_9364

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_9364_1
GWA1_OD1_39_13_partial, Yanofskybacteria, Parcubacteria, Bacteria

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152..1525
DNA (1374bp) protein (458aa)
Chromosomal replication initiator protein DnaA {ECO:0000313|EMBL:KKR02596.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_39_13.;"
Chromosomal replication initiator protein DnaA bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
chromosomal replication initiator protein DnaA
PLM4_65_coex_sep16_scaffold_9364_2
GWA1_OD1_39_13_partial, Yanofskybacteria, Parcubacteria, Bacteria

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1764..2855
DNA (1092bp) protein (364aa)
Polymerase III subunit beta protein {ECO:0000313|EMBL:KKR02595.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_39_13.;"
DNA polymerase III subunit beta bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
DNA polymerase III, beta subunit
PLM4_65_coex_sep16_scaffold_9364_3
unknown

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2855..3142
DNA (288bp) protein (96aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_9364_4
GWA1_OD1_41_6_very_partial, Yanofskybacteria, Parcubacteria, Bacteria

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comp(3160..5328)
DNA (2169bp) protein (723aa)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:KKS13499.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_41_6.;"
Penicillin-binding protein, 1A family bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
1A family penicillin-binding protein
PLM4_65_coex_sep16_scaffold_9364_5
R_OD1_Yanofskybacteria_42_49, Yanofskybacteria, Parcubacteria, Bacteria

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5551..6618
DNA (1068bp) protein (356aa)
mta:Moth_1709 tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_42_49_curated
PLM4_65_coex_sep16_scaffold_9364_6
R_OD1_Yanofskybacteria_41_34, Yanofskybacteria, Parcubacteria, Bacteria

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comp(6891..7133)
DNA (243bp) protein (81aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
hypothetical protein Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI000369FC96
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_41_34_curated
PLM4_65_coex_sep16_scaffold_9364_7
GWC2_OD1_41_9, Yanofskybacteria, Parcubacteria, Bacteria

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comp(7189..7365)
DNA (177bp) protein (59aa)
Holliday junction endonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC Tax=Eubacterium sp. AS15 RepID=J5GLN4_9FIRM
Crossover junction endodeoxyribonuclease RuvC {ECO:0000313|EMBL:KKS25120.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWC2_41_9.;"
PLM4_65_coex_sep16_scaffold_9364_8
GWA2_OD1_44_13b, Giovannonibacteria, Parcubacteria, Bacteria

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comp(7362..7898)
DNA (537bp) protein (179aa)
Transcriptional regulator {ECO:0000313|EMBL:KKT41815.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_13b.;"
Probable transcriptional regulatory protein Desti_1416 bin=GWC2_OD1_43_27 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
PLM4_65_coex_sep16_scaffold_9364_9
R_OD1_Yanofskybacteria_44_22, Yanofskybacteria, Parcubacteria, Bacteria

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comp(7905..8258)
DNA (354bp) protein (118aa)
Holliday junction ATP-dependent DNA helicase RuvB bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Holliday junction DNA helicase RuvB
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_22_curated
PLM4_65_coex_sep16_scaffold_9364_10
GWA2_OD1_44_9, Yanofskybacteria, Parcubacteria, Bacteria

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comp(8240..8977)
DNA (738bp) protein (246aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000313|EMBL:KKT82294.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_9.;"
Holliday junction ATP-dependent DNA helicase RuvB bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Holliday junction ATP-dependent DNA helicase RuvB
PLM4_65_coex_sep16_scaffold_9364_11
R_OD1_Yanofskybacteria_41_34, Yanofskybacteria, Parcubacteria, Bacteria

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comp(9223..10893)
DNA (1671bp) protein (557aa)
Putative type II secretion system protein E bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
type II secretion system protein E
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_41_34_curated
PLM4_65_coex_sep16_scaffold_9364_12
GWE1_OD1_40_10, Yanofskybacteria, Parcubacteria, Bacteria

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11131..11385
DNA (255bp) protein (85aa)
NusA antitermination factor bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
NusA antitermination factor {ECO:0000313|EMBL:KKR36369.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWE1_40_10.;"
transcription termination factor NusA
Displaying 12 items

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