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PLM4_65_coex_sep16_scaffold_6616

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_6616_1
R_OD1_Yanofskybacteria_41_21, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(24..923)
DNA (900bp) protein (300aa)
Protease HtpX homolog bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Heat shock protein HtpX
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_41_21_curated
PLM4_65_coex_sep16_scaffold_6616_2
GWB1_OD1_49_6_curated, Parcubacteria, Bacteria

Not on your lists

comp(937..1296)
DNA (360bp) protein (120aa)
S23 ribosomal protein Tax=uncultured bacterium RepID=K2D0X0_9BACT
hypothetical protein
Tax=GWB1_OD1_49_6_curated
PLM4_65_coex_sep16_scaffold_6616_3
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(1319..1873)
DNA (555bp) protein (185aa)
LemA family protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
LemA family protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
PLM4_65_coex_sep16_scaffold_6616_4
unknown

Not on your lists

comp(1939..2157)
DNA (219bp) protein (73aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_6616_5
unknown

Not on your lists

comp(2154..2408)
DNA (255bp) protein (85aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_6616_6
unknown

Not on your lists

comp(2485..2679)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_6616_7
R_OD1_Yanofskybacteria_44_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(2876..4612)
DNA (1737bp) protein (579aa)
60 kDa chaperonin bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
chaperonin GroEL
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_22_curated
PLM4_65_coex_sep16_scaffold_6616_8
GWA1_OD1_39_13_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(4602..4928)
DNA (327bp) protein (109aa)
10 kDa chaperonin {ECO:0000313|EMBL:KKR02476.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_39_13.;"
10 kDa chaperonin bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
chaperonin cpn10
PLM4_65_coex_sep16_scaffold_6616_9
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(5060..6007)
DNA (948bp) protein (316aa)
Uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
PLM4_65_coex_sep16_scaffold_6616_10
unknown

Not on your lists

6057..6254
DNA (198bp) protein (66aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_6616_11
R_OD1_Yanofskybacteria_38_22b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

6340..7755
DNA (1416bp) protein (472aa)
Excinuclease ABC subunit C bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Excinuclease ABC subunit C
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_38_22b_curated
PLM4_65_coex_sep16_scaffold_6616_12
R_OD1_Yanofskybacteria_39_8b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

7836..8180
DNA (345bp) protein (115aa)
Putative uncharacterized protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_39_8b_curated
PLM4_65_coex_sep16_scaffold_6616_13
GWA1_OD1_39_13_partial, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

8180..8401
DNA (222bp) protein (74aa)
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:KKR02489.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_39_13.;"
seg 28..42 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
preprotein translocase subunit SecG
PLM4_65_coex_sep16_scaffold_6616_14
GWF1_OD1_44_227, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

8423..10207
DNA (1785bp) protein (595aa)
Putative ABC transporter substrate binding protein bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKT53212.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWF1_44_227.;"
putative periplasmic oligopeptide-binding protein of oligopeptide ABC transporter
PLM4_65_coex_sep16_scaffold_6616_15
R_OD1_Yanofskybacteria_43_22, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

10319..11218
DNA (900bp) protein (300aa)
Bifunctional phosphoglucose/phosphomannose isomerase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
pgi; bifunctional phosphoglucose/phosphomannose isomerase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_43_22_curated
PLM4_65_coex_sep16_scaffold_6616_trna_1
unknown

Not on your lists

11611..11694
DNA (84bp)
transferRNA Leu
PLM4_65_coex_sep16_scaffold_6616_16
unknown

Not on your lists

11617..11769
DNA (153bp) protein (51aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_6616_17
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

11785..12537
DNA (753bp) protein (251aa)
RNA-metabolising metallo-beta-lactamase bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RNA-metabolising metallo-beta-lactamase
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
PLM4_65_coex_sep16_scaffold_6616_18
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

12689..13684
DNA (996bp) protein (332aa)
RNA-metabolising metallo-beta-lactamase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
PLM4_65_coex_sep16_scaffold_6616_19
unknown

Not on your lists

13694..13909
DNA (216bp) protein (72aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_6616_20
R_OD1_Yanofskybacteria_42_49, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

14256..15224
DNA (969bp) protein (323aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035FD2BB
Tax=RIFCSPLOWO2_01_FULL_OD1_Yanofskybacteria_42_49_curated
PLM4_65_coex_sep16_scaffold_6616_21
unknown

Not on your lists

15249..15491
DNA (243bp) protein (81aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_6616_22
unknown

Not on your lists

15494..15763
DNA (270bp) protein (90aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_6616_23
GWA1_OP11_45_10_partial, Microgenomates, Bacteria

Not on your lists

comp(15870..17090)
DNA (1221bp) protein (407aa)
Phosphomannomutase Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QYD8_SPHPG
Phosphomannomutase {ECO:0000313|EMBL:KKT86811.1}; species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA1_45_10.;"
phosphomannomutase
PLM4_65_coex_sep16_scaffold_6616_24
R_OD1_Yanofskybacteria_47_9b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

17117..18079
DNA (963bp) protein (321aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2ETR7_9BACT
GTP-binding protein YchF
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_47_9b_curated
PLM4_65_coex_sep16_scaffold_6616_25
R_OD1_Yanofskybacteria_41_21, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

18108..18656
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1Z9Q2_9BACT
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_41_21_curated
Displaying 26 items

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