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PLM4_65_coex_sep16_scaffold_1652

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_1652_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..475
DNA (474bp) protein (158aa)
glutamate synthase (EC:1.4.1.13)
Glutamate synthase (NADPH) GltB2 subunit {ECO:0000313|EMBL:ABQ26672.1}; EC=1.4.1.13 {ECO:0000313|EMBL:ABQ26672.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Glutamate synthase (NADPH) GltB2 subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4F4_GEOUR
PLM4_65_coex_sep16_scaffold_1652_2
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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565..1014
DNA (450bp) protein (150aa)
NADPH-dependent glutamate synthase, iron-sulfur cluster-binding subunit Tax=Geobacter metallireducens RepID=Q39UT8_GEOMG
4Fe-4S ferredoxin
4Fe-4S ferredoxin {ECO:0000313|EMBL:AJE03629.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_1652_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1087..2364
DNA (1278bp) protein (426aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4F2_GEOUR
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ABQ26670.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1652_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2435..3556
DNA (1122bp) protein (374aa)
Glutamate synthase (NADPH) GltB1 subunit {ECO:0000313|EMBL:ABQ26669.1}; EC=1.4.1.13 {ECO:0000313|EMBL:ABQ26669.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Glutamate synthase (NADPH) GltB1 subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4F1_GEOUR
glutamine amidotransferase, class-II
PLM4_65_coex_sep16_scaffold_1652_5
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3667..4413
DNA (747bp) protein (249aa)
Glutamate synthase alpha subunit domain protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M4T4_GEODF
Uncharacterized protein {ECO:0000313|EMBL:GAM11055.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
glutamate synthase alpha subunit domain-containing protein
PLM4_65_coex_sep16_scaffold_1652_6
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4629..6428
DNA (1800bp) protein (600aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
Elongation factor 4 Tax=Geobacter metallireducens RepID=LEPA_GEOMG
GTP-binding protein LepA
PLM4_65_coex_sep16_scaffold_1652_7
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6532..7200
DNA (669bp) protein (223aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
Signal peptidase I Tax=Geobacter sulfurreducens RepID=D7AI48_GEOSK
lepB; signal peptidase I
PLM4_65_coex_sep16_scaffold_1652_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7343..8014
DNA (672bp) protein (224aa)
bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF40_GEOUR
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_1652_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8130..9404
DNA (1275bp) protein (425aa)
dihydroorotase, multifunctional complex type (EC:3.5.2.3)
Dihydroorotase {ECO:0000255|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000255|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000255|HAMAP-Rule:MF_00220};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Dihydroorotase Tax=Geobacter uraniireducens (strain Rf4) RepID=PYRC_GEOUR
PLM4_65_coex_sep16_scaffold_1652_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9512..10633
DNA (1122bp) protein (374aa)
carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Carbamoyl-phosphate synthase small chain Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF43_GEOUR
PLM4_65_coex_sep16_scaffold_1652_11
unknown

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10630..10827
DNA (198bp) protein (66aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_1652_12
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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10830..11732
DNA (903bp) protein (301aa)
Radical SAM domain iron-sulfur cluster-binding oxidoreductase Tax=Geobacter sulfurreducens RepID=D7AI55_GEOSK
radical SAM domain-containing iron-sulfur cluster-binding oxidoreductase
Radical SAM protein {ECO:0000313|EMBL:AJY70984.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
PLM4_65_coex_sep16_scaffold_1652_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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11888..14272
DNA (2385bp) protein (795aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Carbamoyl-phosphate synthase large chain Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF49_GEOUR
carbamoyl-phosphate synthase large subunit
Displaying 13 items

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