ggKbase home page

PLM4_65_coex_sep16_scaffold_2381

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_2381_1

Not on your lists

comp(3..206)
DNA (204bp) protein (68aa)
Ribosome maturation factor RimM Tax=uncultured bacterium RepID=K2AS27_9BACT
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rimM; 16S rRNA processing protein RimM
PLM4_65_coex_sep16_scaffold_2381_2
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206..436)
DNA (231bp) protein (77aa)
UPF0109 protein Geob_1488 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M592_GEODF
KH domain-containing protein
UPF0109 protein Geob_1488 {ECO:0000256|HAMAP-Rule:MF_00088}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_2381_3

Not on your lists


comp(490..756)
DNA (267bp) protein (89aa)
30S ribosomal protein S16 Tax=Bacteria RepID=D7AFW8_GEOSK
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM4_65_coex_sep16_scaffold_2381_4
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(868..2217)
DNA (1350bp) protein (450aa)
Signal recognition particle protein Tax=Geobacter metallireducens RepID=Q39RN4_GEOMG
ffh; signal recognition particle protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_2381_5
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2504..2761)
DNA (258bp) protein (86aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WRX7_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW12148.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_2381_6
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2887..3144
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Geobacter metallireducens RepID=Q39RN2_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB33092.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_2381_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3137..3619
DNA (483bp) protein (161aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G803_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ27921.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2381_8
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3799..5226)
DNA (1428bp) protein (476aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Adenosylhomocysteinase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M9N2_GEODF
PLM4_65_coex_sep16_scaffold_2381_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5274..6374)
DNA (1101bp) protein (367aa)
2-nitropropane dioxygenase, NPD Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5W1_GEOUR
2-nitropropane dioxygenase
2-nitropropane dioxygenase, NPD {ECO:0000313|EMBL:ABQ27179.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2381_10
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(6516..9398)
DNA (2883bp) protein (961aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI0003605204
hypothetical protein
Tax=RBG_16_Caldithrix_48_16_curated
PLM4_65_coex_sep16_scaffold_2381_11
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9475..10833)
DNA (1359bp) protein (453aa)
Uncharacterized protein Tax=Geobacter metallireducens RepID=Q39Q63_GEOMG
hypothetical protein
Tax=GWC2_Geobacteraceae_53_11_curated
PLM4_65_coex_sep16_scaffold_2381_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11192..11458)
DNA (267bp) protein (89aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G438_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ26556.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2381_13
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11505..11639)
DNA (135bp) protein (45aa)
fructose-1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Fructose-1,6-bisphosphatase class 1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M1N3_GEODF
Displaying 13 items

View Taxonomy