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PLM4_65_coex_sep16_scaffold_2415

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_2415_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..821
DNA (819bp) protein (273aa)
Protein TolB Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDC0_GEOUR
WD40 domain-containing protein
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2415_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

951..1526
DNA (576bp) protein (192aa)
OmpA/MotB domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDB9_GEOUR
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ABQ24418.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2415_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1848..2675
DNA (828bp) protein (276aa)
Tetratricopeptide TPR_2 repeat protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDD8_GEOUR
TPR repeat-containing protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABQ24417.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2415_4
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2745..3020)
DNA (276bp) protein (92aa)
Sec-independent protein translocase protein TatA Tax=Geobacter sp. (strain M18) RepID=E8WR08_GEOS8
twin-arginine translocation protein, TatA/E family subunit
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_2415_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3283..4197
DNA (915bp) protein (305aa)
quinolinate synthetase (EC:2.1.1.63)
Quinolinate synthase A {ECO:0000255|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000255|HAMAP-Rule:MF_00568};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Quinolinate synthase A Tax=Geobacter uraniireducens (strain Rf4) RepID=NADA_GEOUR
PLM4_65_coex_sep16_scaffold_2415_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4317..4850
DNA (534bp) protein (178aa)
Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GDD5_GEOUR
carbonic anhydrase
Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein {ECO:0000313|EMBL:ABQ24414.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_2415_7
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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5739..9002
DNA (3264bp) protein (1088aa)
Uncharacterized protein Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8GTZ5_DEIGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD26635.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
PLM4_65_coex_sep16_scaffold_2415_8
unknown

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9065..9259
DNA (195bp) protein (65aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_2415_9
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9256..10656
DNA (1401bp) protein (467aa)
Tax=GWC2_Geobacteraceae_53_11_curated
PLM4_65_coex_sep16_scaffold_2415_10
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10710..11201
DNA (492bp) protein (164aa)
Conserved repeat domain protein Tax=Geobacter sp. (strain M18) RepID=E8WMN7_GEOS8
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_2415_11
unknown

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11340..11642
DNA (303bp) protein (101aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_2415_12
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

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11839..12639
DNA (801bp) protein (267aa)
Tax=CG_Mariprof_05
PLM4_65_coex_sep16_scaffold_2415_13
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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12723..13973
DNA (1251bp) protein (417aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WM25_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW11745.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_2415_14
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13994..20536
DNA (6543bp) protein (2181aa)
Conserved repeat domain protein Tax=Geobacter sp. (strain M18) RepID=E8WM24_GEOS8
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_2415_15
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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20674..20778
DNA (105bp) protein (35aa)
Putative uncharacterized protein bin=GWC2_Geobacteraceae_55_20 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_2415_16
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(21282..21989)
DNA (708bp) protein (236aa)
Methyltransferase type 12 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FEW5_DESAA
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ACL03642.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
PLM4_65_coex_sep16_scaffold_2415_17
GWC2_Planctomycetes_49_10_curated, Physcisphaerae, Planctomycetes, Bacteria

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comp(22133..22516)
DNA (384bp) protein (128aa)
Uncharacterized protein Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ASE7_PELPD
hypothetical protein
Tax=GWC2_Planctomycetes_49_10_curated
PLM4_65_coex_sep16_scaffold_2415_18
unknown

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comp(22518..22823)
DNA (306bp) protein (102aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_2415_19
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(22813..23376)
DNA (564bp) protein (188aa)
RNA polymerase, sigma-24 subunit, RpoE Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ASE6_PELPD
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, RpoE {ECO:0000313|EMBL:ABL00267.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
PLM4_65_coex_sep16_scaffold_2415_20
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(23604..24011)
DNA (408bp) protein (136aa)
Uncharacterized protein bin=GWD2_Nitrospirae-related_57_8 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
PLM4_65_coex_sep16_scaffold_2415_21
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(23995..24225)
DNA (231bp) protein (77aa)
Uncharacterized protein Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PBB6_DEFDS
transcriptional regulator, AbrB family
Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
PLM4_65_coex_sep16_scaffold_2415_22
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(24442..24792)
DNA (351bp) protein (117aa)
DNA-binding protein Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00037C6E64
DNA-binding protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_2415_23
delta proteobacterium MLMS-1, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(24860..25060)
DNA (201bp) protein (67aa)
Uncharacterized protein Tax=delta proteobacterium MLMS-1 RepID=Q1NWA8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EAT05993.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium MLMS-1.;"
hypothetical protein
Displaying 23 items

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