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PLM4_65_coex_sep16_scaffold_12350

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_12350_1
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..891
DNA (891bp) protein (297aa)
Phospholipase D/Transphosphatidylase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M6Q1_GEODF
phospholipase D/Transphosphatidylase
Cardiolipin synthase, putative {ECO:0000313|EMBL:ACM20111.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_12350_2
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1059..1460)
DNA (402bp) protein (134aa)
Ribonuclease VapC Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6A7_GEOUR
PilT domain-containing protein
Tax=BJP_IG2157_Desulfuromonadales_56_134
PLM4_65_coex_sep16_scaffold_12350_3
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1457..1702)
DNA (246bp) protein (82aa)
CopG domain protein DNA-binding domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6A8_GEOUR
CopG/DNA-binding domain-containing protein
Tax=BJP_IG2157_Desulfuromonadales_56_134
PLM4_65_coex_sep16_scaffold_12350_4
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1801..2106)
DNA (306bp) protein (102aa)
Antitoxin, XRE family Tax=Geobacter metallireducens RepID=Q39RD7_GEOMG
antitoxin, XRE family
Antitoxin, XRE family {ECO:0000313|EMBL:ABB33187.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_12350_5
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2689..3186)
DNA (498bp) protein (166aa)
Putative uncharacterized protein bin=GWF2_Geobacter_54_21 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_12350_6
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

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3478..3729
DNA (252bp) protein (84aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5SV52_9BACT
hypothetical protein
Tax=RBG_13_Nitrospirae_41_22_curated
PLM4_65_coex_sep16_scaffold_12350_7
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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3732..3941
DNA (210bp) protein (70aa)
Toxin-antitoxin system, antitoxin component, HicB family Tax=Anaerostipes RepID=B0MIJ9_9FIRM
hypothetical protein
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
PLM4_65_coex_sep16_scaffold_12350_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5037..5552)
DNA (516bp) protein (172aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCC9_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ24771.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_12350_9
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5885..7114)
DNA (1230bp) protein (410aa)
ABC transporter, membrane protein Tax=Geobacter metallireducens RepID=Q39R73_GEOMG
ABC transporter membrane protein
ABC transporter, membrane protein {ECO:0000313|EMBL:ABB33251.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_12350_10
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7111..7836)
DNA (726bp) protein (242aa)
ABC transporter, ATP-binding protein Tax=Geobacter metallireducens RepID=Q39R72_GEOMG
ABC transporter ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABB33252.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_12350_11
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7837..8565)
DNA (729bp) protein (243aa)
Efflux pump, RND family, membrane fusion protein Tax=Geobacter metallireducens RepID=Q39R71_GEOMG
RND family efflux pump membrane fusion protein
Efflux pump, RND family, membrane fusion protein {ECO:0000313|EMBL:ABB33253.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_12350_12
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8519..8995)
DNA (477bp) protein (159aa)
Efflux pump, RND family, membrane fusion protein Tax=Geobacter metallireducens RepID=Q39R71_GEOMG
RND family efflux pump membrane fusion protein
Efflux pump, RND family, membrane fusion protein {ECO:0000313|EMBL:ABB33253.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_12350_13
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9484..10611)
DNA (1128bp) protein (376aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M146_GEODF
hypothetical protein
DUF362 iron-sulfur cluster-binding domain protein {ECO:0000313|EMBL:ACM19116.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_12350_14
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10882..11505)
DNA (624bp) protein (208aa)
tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
tRNA (guanine-N(7)-)-methyltransferase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M6R0_GEODF
PLM4_65_coex_sep16_scaffold_12350_15
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11690..12904
DNA (1215bp) protein (405aa)
ATP-dependent RNA helicase RhlB {ECO:0000256|HAMAP-Rule:MF_00661}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00661};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
ATP-dependent RNA helicase RhlB Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GB95_GEOUR
DEAD/DEAH box helicase
PLM4_65_coex_sep16_scaffold_12350_16
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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12962..13645
DNA (684bp) protein (228aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
7-cyano-7-deazaguanine synthase Tax=Geobacter metallireducens RepID=QUEC_GEOMG
7-cyano-7-deazaguanine synthase
PLM4_65_coex_sep16_scaffold_12350_17
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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13744..14622
DNA (879bp) protein (293aa)
GTP cyclohydrolase FolE2 {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_01527};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
GTP cyclohydrolase FolE2 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M0M8_GEODF
GTP cyclohydrolase
PLM4_65_coex_sep16_scaffold_12350_18
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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14841..15431
DNA (591bp) protein (197aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M0M9_GEODF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM19066.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Displaying 18 items

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