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PLM4_65_coex_sep16_scaffold_3364

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3364_1
unknown

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1..117
DNA (117bp) protein (39aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3364_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(124..366)
DNA (243bp) protein (81aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAQ3_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25345.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3364_3
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(502..747)
DNA (246bp) protein (82aa)
LexA repressor 1 {ECO:0000255|HAMAP-Rule:MF_00015}; EC=3.4.21.88 {ECO:0000255|HAMAP-Rule:MF_00015};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
LexA repressor 1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=LEXA1_GEOSL
lexA-1; LexA family transcriptional repressor
PLM4_65_coex_sep16_scaffold_3364_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(759..1013)
DNA (255bp) protein (85aa)
SOS-response transcriptional repressor LexA (EC:3.4.21.88)
LexA repressor {ECO:0000255|HAMAP-Rule:MF_00015}; EC=3.4.21.88 {ECO:0000255|HAMAP-Rule:MF_00015};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
LexA repressor Tax=Geobacter uraniireducens (strain Rf4) RepID=LEXA_GEOUR
PLM4_65_coex_sep16_scaffold_3364_5
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1210..2421
DNA (1212bp) protein (404aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAQ5_GEOUR
hypothetical protein
Transporter, DUF21, CBS domain pair and CorC_HlyC domain-containing, putative {ECO:0000313|EMBL:ACM20133.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_3364_6
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2431..3357)
DNA (927bp) protein (309aa)
Integral membrane protein TerC Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAQ6_GEOUR
integral membrane protein TerC
Integral membrane protein TerC {ECO:0000313|EMBL:AJE03972.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_3364_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3608..4195
DNA (588bp) protein (196aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAK9_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25378.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3364_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4336..5202
DNA (867bp) protein (289aa)
TonB family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAM9_GEOUR
TonB family protein
TonB family protein {ECO:0000313|EMBL:ABQ25377.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3364_9
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5210..6085)
DNA (876bp) protein (292aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
Glucose-1-phosphate uridylyltransferase Tax=Geobacter metallireducens RepID=Q39WH7_GEOMG
galU; glucose-1-phosphate uridylyltransferase
PLM4_65_coex_sep16_scaffold_3364_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6085..6954)
DNA (870bp) protein (290aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Methylenetetrahydrofolate reductase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAM7_GEOUR
methylenetetrahydrofolate reductase
PLM4_65_coex_sep16_scaffold_3364_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6951..7598)
DNA (648bp) protein (216aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAM6_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25374.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3364_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7669..8529)
DNA (861bp) protein (287aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5)
Bifunctional protein FolD {ECO:0000255|HAMAP-Rule:MF_01576}; Includes:; Methylenetetrahydrofolate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=1.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01576};; Includes:; Methenyltetrahydrofolate cyclohydrolase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=3.5.4.9 {ECO:0000255|HAMAP-Rule:MF_01576};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Bifunctional protein FolD Tax=Geobacter uraniireducens (strain Rf4) RepID=FOLD_GEOUR
PLM4_65_coex_sep16_scaffold_3364_13
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8681..8929)
DNA (249bp) protein (83aa)
Putative regulatory protein, FmdB family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAM4_GEOUR
FmdB family regulatory protein
Putative regulatory protein, FmdB family {ECO:0000313|EMBL:ABQ25372.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3364_14
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8945..9112)
DNA (168bp) protein (56aa)
Putative regulatory protein, FmdB family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAM4_GEOUR
FmdB family regulatory protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM4_65_coex_sep16_scaffold_3364_15
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9219..9542)
DNA (324bp) protein (108aa)
UPF0235 protein Gura_1167 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAM3_GEOUR
hypothetical protein
UPF0235 protein Gura_1167 {ECO:0000256|HAMAP-Rule:MF_00634}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3364_16
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9532..9981)
DNA (450bp) protein (150aa)
DivIVA family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAM2_GEOUR
DivIVA family protein
DivIVA family protein {ECO:0000313|EMBL:ABQ25370.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3364_17
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9999..10292)
DNA (294bp) protein (98aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAM1_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25369.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3364_18
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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10458..10802
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AMQ9_GEOSK
rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:AJE04169.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_3364_19
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10906..11880)
DNA (975bp) protein (325aa)
ABC transporter, membrane protein Tax=Geobacter metallireducens RepID=Q39XX7_GEOMG
ybhR-1; ABC transporter membrane protein
ABC transporter, membrane protein {ECO:0000313|EMBL:ABB30897.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_3364_20
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11880..12032)
DNA (153bp) protein (51aa)
ABC-2 type transporter Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GAP2_GEOUR
ABC-2 type transporter
ABC-2 type transporter {ECO:0000313|EMBL:ABQ25354.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Displaying 20 items

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