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PLM4_65_coex_sep16_scaffold_3606

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_3606_1
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(273..560)
DNA (288bp) protein (96aa)
Uncharacterized protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Anabaena cylindrica genus=Anabaena taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
plasmid stabilization system
Tax=CG_Syntroph_01
PLM4_65_coex_sep16_scaffold_3606_2
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(560..826)
DNA (267bp) protein (89aa)
Gsr3504 protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
addiction module antidote protein
Tax=CG_Syntroph_01
PLM4_65_coex_sep16_scaffold_3606_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1006..1476)
DNA (471bp) protein (157aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G735_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ27603.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3606_4
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1466..1858)
DNA (393bp) protein (131aa)
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_65_coex_sep16_scaffold_3606_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2049..2525
DNA (477bp) protein (159aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G734_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ27602.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3606_6
RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2554..2952)
DNA (399bp) protein (133aa)
Tax=RIFOXYD2_FULL_Deltaproteobacteria_66_9_curated
PLM4_65_coex_sep16_scaffold_3606_7
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3003..3554)
DNA (552bp) protein (184aa)
Putative uncharacterized protein bin=GWC2_Syntrophobacterales_56_13 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_58_17_curated
PLM4_65_coex_sep16_scaffold_3606_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4341..6371
DNA (2031bp) protein (677aa)
1A family penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ABQ26609.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABQ26609.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Penicillin-binding protein, 1A family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G491_GEOUR
PLM4_65_coex_sep16_scaffold_3606_9
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6462..6845)
DNA (384bp) protein (128aa)
Glyoxalase/bleomycin resistance protein/dioxygenase bin=GWF2_Geobacter_54_21 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
lactoylglutathione lyase family protein
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_3606_10
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6996..7871
DNA (876bp) protein (292aa)
33 kDa chaperonin Tax=Geobacter metallireducens RepID=HSLO_GEOMG
hslO; Hsp33-like chaperonin
33 kDa chaperonin {ECO:0000255|HAMAP-Rule:MF_00117}; Heat shock protein 33 homolog {ECO:0000255|HAMAP-Rule:MF_00117}; Short=HSP33 {ECO:0000255|HAMAP-Rule:MF_00117};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_3606_11
unknown

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7868..8212
DNA (345bp) protein (115aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3606_12
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8272..8577)
DNA (306bp) protein (102aa)
Putative uncharacterized protein bin=GWC2_Geobacteraceae_55_20 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_3606_13
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8862..10499
DNA (1638bp) protein (546aa)
ABC transporter related Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E904_GEOLS
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACD96717.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
PLM4_65_coex_sep16_scaffold_3606_14
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10894..11076
DNA (183bp) protein (61aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3A2_GEODF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM19512.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_3606_15
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11396..11929)
DNA (534bp) protein (178aa)
hypothetical protein bin=bin1_lowGC species=Schlesneria paludicola genus=Schlesneria taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
PLM4_65_coex_sep16_scaffold_3606_16
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11976..12638)
DNA (663bp) protein (221aa)
Isochorismatase hydrolase bin=GWC2_Geobacteraceae_55_20 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
isochorismatase hydrolase
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_3606_17
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13075..14064)
DNA (990bp) protein (330aa)
ErfK/YbiS/YcfS/YnhG family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3H8_GEOUR
ErfK/YbiS/YcfS/YnhG family protein
Putative L,D-transpeptidase YafK {ECO:0000313|EMBL:GAM10749.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
PLM4_65_coex_sep16_scaffold_3606_18
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14208..14510)
DNA (303bp) protein (101aa)
Lipoprotein, putative Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ALI3_PELPD
putative lipoprotein
Lipoprotein, putative {ECO:0000313|EMBL:ABK98203.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
PLM4_65_coex_sep16_scaffold_3606_19
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14562..15788)
DNA (1227bp) protein (409aa)
ErfK/YbiS/YcfS/YnhG family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3I0_GEOUR
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:ABQ26348.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_3606_20
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

16499..17095
DNA (597bp) protein (199aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X8U8_9NOST
putative oxidoreductase, aryl-alcohol dehydrogenase like protein
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:AFZ28501.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
PLM4_65_coex_sep16_scaffold_3606_21
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17394..17753
DNA (360bp) protein (120aa)
Putative uncharacterized protein bin=GWC2_Geobacteraceae_55_20 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_3606_22
unknown

Not on your lists

comp(17842..17955)
DNA (114bp) protein (38aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_3606_23
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18098..18931)
DNA (834bp) protein (278aa)
Chemotaxis protein CheW Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G5M3_9DELT
cheW1; protein CheW1
Tax=CG_Syntroph_02
PLM4_65_coex_sep16_scaffold_3606_24
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19363..19728
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E7J3_GEOLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD96510.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
Displaying 24 items

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