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PLM4_65_coex_sep16_scaffold_6196

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_6196_1
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..490)
DNA (489bp) protein (163aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2J8_GEODF
4Fe-4S ferredoxin
Menaquinol oxidoreductase complex Cbc4, iron-sulfur cluster-binding subunit, putative {ECO:0000313|EMBL:ACM19377.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM4_65_coex_sep16_scaffold_6196_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(487..960)
DNA (474bp) protein (158aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBH1_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25068.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_6196_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1025..2758)
DNA (1734bp) protein (578aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GBH4_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ25071.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_6196_4
bacterium UASB270, Bacteria

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3372..3848
DNA (477bp) protein (159aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; species="Bacteria.;" source="bacterium UASB270.;"
Lysozyme Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCA4_9GAMM
phage related lysozyme
PLM4_65_coex_sep16_scaffold_6196_5
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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3862..4275
DNA (414bp) protein (138aa)
Putative uncharacterized protein Tax=uncultured Acidobacteria bacterium RepID=Q7X2U5_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAP58619.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
conserved exported protein of unknown function
PLM4_65_coex_sep16_scaffold_6196_6
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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4641..4961
DNA (321bp) protein (107aa)
Tax=BJP_IG2069_Syntrophobacterales_46_30
PLM4_65_coex_sep16_scaffold_6196_7
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5358..5855)
DNA (498bp) protein (166aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3F6_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAM11567.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
PLM4_65_coex_sep16_scaffold_6196_8
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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6010..6285
DNA (276bp) protein (92aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WU73_GEOS8
hypothetical protein
Tax=RBG_16_Acidobacteria_68_9_curated
PLM4_65_coex_sep16_scaffold_6196_9
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6304..7947)
DNA (1644bp) protein (548aa)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ABL00216.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABL00216.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
PAS/PAC sensor hybrid histidine kinase Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AS95_PELPD
PAS/PAC sensor hybrid histidine kinase
PLM4_65_coex_sep16_scaffold_6196_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7961..8206)
DNA (246bp) protein (82aa)
Histidine kinase (EC:2.7.13.3) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Uncharacterized protein {ECO:0000313|EMBL:KIC89837.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
PAS/PAC sensor hybrid histidine kinase
PLM4_65_coex_sep16_scaffold_6196_11
Nitrosomonas eutropha, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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8534..8872
DNA (339bp) protein (113aa)
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96)
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000255|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000255|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Short=PCD {ECO:0000255|HAMAP-Rule:MF_00434};; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas eutropha (strain C91).;"
Putative pterin-4-alpha-carbinolamine dehydratase Tax=Nitrosomonas eutropha (strain C91) RepID=PHS_NITEC
PLM4_65_coex_sep16_scaffold_6196_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8912..10090
DNA (1179bp) protein (393aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tax=Pedosphaera parvula Ellin514 RepID=B9XRM6_9BACT
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:EEF57497.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
pyridine nucleotide-disulfide oxidoreductase
PLM4_65_coex_sep16_scaffold_6196_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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10250..10480
DNA (231bp) protein (77aa)
Short-chain dehydrogenase/reductase SDR Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM57_9BACT
short-chain dehydrogenase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CBE67943.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Displaying 13 items

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