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PLM4_65_coex_sep16_scaffold_6622

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_6622_1
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..447)
DNA (447bp) protein (149aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
CheA signal transduction histidine kinase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G689_GEOUR
CheA signal transduction histidine kinase
PLM4_65_coex_sep16_scaffold_6622_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(497..862)
DNA (366bp) protein (122aa)
Response regulator receiver protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G690_GEOUR
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABQ27308.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_6622_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(859..2559)
DNA (1701bp) protein (567aa)
Response regulator receiver protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G691_GEOUR
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABQ27309.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_6622_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2649..3575)
DNA (927bp) protein (309aa)
GTPase Der Tax=Geobacter uraniireducens (strain Rf4) RepID=DER_GEOUR
engA; GTP-binding protein EngA
GTPase Der {ECO:0000255|HAMAP-Rule:MF_00195}; GTP-binding protein EngA {ECO:0000255|HAMAP-Rule:MF_00195}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_6622_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3602..3850)
DNA (249bp) protein (83aa)
GTPase Der Tax=Geobacter uraniireducens (strain Rf4) RepID=DER_GEOUR
engA; GTP-binding protein EngA
GTPase Der {ECO:0000255|HAMAP-Rule:MF_00195}; GTP-binding protein EngA {ECO:0000255|HAMAP-Rule:MF_00195}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_6622_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3870..4763)
DNA (894bp) protein (298aa)
GTPase Era Tax=Geobacter uraniireducens (strain Rf4) RepID=ERA_GEOUR
era; GTP-binding protein Era
GTPase Era {ECO:0000255|HAMAP-Rule:MF_00367}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_6622_7
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4760..5830)
DNA (1071bp) protein (357aa)
Radical SAM domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G694_GEOUR
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABQ27312.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_6622_8
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5830..6552)
DNA (723bp) protein (241aa)
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Ribonuclease 3 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G695_GEOUR
PLM4_65_coex_sep16_scaffold_6622_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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6715..7359
DNA (645bp) protein (215aa)
dTMP kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000255|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000255|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000255|HAMAP-Rule:MF_00165}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Thymidylate kinase Tax=Geobacter uraniireducens (strain Rf4) RepID=KTHY_GEOUR
PLM4_65_coex_sep16_scaffold_6622_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7435..8400
DNA (966bp) protein (322aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
DNA polymerase III, delta prime subunit {ECO:0000313|EMBL:ABQ27315.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABQ27315.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
DNA polymerase III, delta prime subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G697_GEOUR
PLM4_65_coex_sep16_scaffold_6622_11
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8532..8672
DNA (141bp) protein (47aa)
PSP1 superfamily protein Tax=Geobacter metallireducens RepID=Q39T79_GEOMG
PSP1 superfamily protein
PSP1 superfamily protein {ECO:0000313|EMBL:ABB32545.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_6622_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8704..9321
DNA (618bp) protein (206aa)
PSP1 domain protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G698_GEOUR
PSP1 domain-containing protein
PSP1 domain protein {ECO:0000313|EMBL:ABQ27316.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_6622_13
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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9318..10847
DNA (1530bp) protein (510aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00012840};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
Methionine--tRNA ligase Tax=Geobacter metallireducens RepID=Q39T78_GEOMG
metG; methionyl-tRNA ligase
PLM4_65_coex_sep16_scaffold_6622_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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10929..11183
DNA (255bp) protein (85aa)
Putative uncharacterized protein bin=GWE1_T_denit_62_9 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
PLM4_65_coex_sep16_scaffold_6622_15
unknown

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comp(11121..11321)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_6622_16
unknown

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comp(11308..11466)
DNA (159bp) protein (53aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_6622_17
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11640..12224)
DNA (585bp) protein (195aa)
Putative uncharacterized protein Tax=Geobacter sp. (strain M18) RepID=E8WIV6_GEOS8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW13460.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM4_65_coex_sep16_scaffold_6622_18
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

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12545..12994
DNA (450bp) protein (150aa)
GCN5-related N-acetyltransferase Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EA33_GEOLS
GCN5 family acetyltransferase {ECO:0000313|EMBL:KIJ82423.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
N-acetyltransferase GCN5
PLM4_65_coex_sep16_scaffold_6622_19
unknown

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comp(13154..13258)
DNA (105bp) protein (35aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_6622_20
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13384..14307)
DNA (924bp) protein (308aa)
Response receiver-modulated nucleotide cyclase, GGDEF-related domain-containing Tax=Geobacter sulfurreducens RepID=D7AL41_GEOSK
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AJE02879.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
PLM4_65_coex_sep16_scaffold_6622_21
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14294..15052)
DNA (759bp) protein (253aa)
Metal-dependent phosphohydrolase, HDOD domain-containing Tax=Geobacter sulfurreducens RepID=D7AL42_GEOSK
HD family phosphohydrolase {ECO:0000313|EMBL:KIE44139.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
metal-dependent phosphohydrolase, HDOD domain-containing
Displaying 21 items

View Taxonomy