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PLM4_65_coex_sep16_scaffold_4357

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_4357_1
unknown

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1..90
DNA (90bp) protein (30aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4357_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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92..919
DNA (828bp) protein (276aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000313|EMBL:ABQ26257.1}; EC=6.3.5.3 {ECO:0000313|EMBL:ABQ26257.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Phosphoribosylformylglycinamidine synthase subunit I Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G389_GEOUR
PLM4_65_coex_sep16_scaffold_4357_3
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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962..2383
DNA (1422bp) protein (474aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Amidophosphoribosyltransferase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2B6_GEODF
amidophosphoribosyltransferase
PLM4_65_coex_sep16_scaffold_4357_4
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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2380..2952
DNA (573bp) protein (191aa)
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Orotate phosphoribosyltransferase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2B5_GEODF
PLM4_65_coex_sep16_scaffold_4357_5
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3173..3424
DNA (252bp) protein (84aa)
Putative uncharacterized protein bin=GWB2_Geobacter-like_52_12 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB2_Geobacteraceae_52_12_curated
PLM4_65_coex_sep16_scaffold_4357_6
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3393..3932
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Geobacter metallireducens RepID=Q39UA8_GEOMG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB32166.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
PLM4_65_coex_sep16_scaffold_4357_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4379..6424)
DNA (2046bp) protein (682aa)
PKD domain-containing protein Tax=Halorhabdus tiamatea SARL4B RepID=U2DLZ0_9EURY
hypothetical PKD domain protein
PKD domain-containing protein {ECO:0000313|EMBL:ERJ06777.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.;"
PLM4_65_coex_sep16_scaffold_4357_8
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

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comp(6865..7515)
DNA (651bp) protein (217aa)
Phosphoribosylglycinamide formyltransferase, folate-dependent bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
phosphoribosylglycinamide formyltransferase
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_4357_9
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

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comp(7499..8593)
DNA (1095bp) protein (365aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase Tax=Geobacter uraniireducens (strain Rf4) RepID=PUR5_GEOUR
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_65_coex_sep16_scaffold_4357_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8697..9983
DNA (1287bp) protein (429aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3H1_GEOUR
oxidoreductase FAD/NAD(P)-binding subunit
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_4357_11
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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10057..10917
DNA (861bp) protein (287aa)
Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit; Short=DHOD B;; Short=DHODase B;; Short=DHOdehase B;; EC=1.3.1.14;; Dihydroorotate oxidase B; Orotate reductase (NADH); species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=PYRDB_GEOUR
dihydroorotate dehydrogenase 1B
PLM4_65_coex_sep16_scaffold_4357_12
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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10998..11705
DNA (708bp) protein (236aa)
lysine 2,3-aminomutase YodO family protein (EC:5.4.3.2)
L-lysine 2,3-aminomutase {ECO:0000313|EMBL:ABQ26337.1}; EC=5.4.3.2 {ECO:0000313|EMBL:ABQ26337.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
L-lysine 2,3-aminomutase Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G3G9_GEOUR
Displaying 12 items

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