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PLM4_65_coex_sep16_scaffold_3317_9

Organism: PLM4_65_coex_sep16_Deltaproteobacteria_Geobacteraceae_54_17

near complete RP 50 / 55 MC: 3 BSCG 47 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(5569..6150)

Top 3 Functional Annotations

Value Algorithm Source
peptidyl-tRNA hydrolase (EC:3.1.1.29) similarity KEGG
DB: KEGG
  • Identity: 74.3
  • Coverage: 191.0
  • Bit_score: 294
  • Evalue 1.80e-77
Peptidyl-tRNA hydrolase {ECO:0000255|HAMAP-Rule:MF_00083}; Short=PTH {ECO:0000255|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000255|HAMAP-Rule:MF_00083};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 191.0
  • Bit_score: 294
  • Evalue 8.80e-77
Peptidyl-tRNA hydrolase Tax=Geobacter uraniireducens (strain Rf4) RepID=PTH_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 191.0
  • Bit_score: 294
  • Evalue 6.30e-77

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Taxonomy

Geobacter uraniireducens → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGGCCACAAAACTGATTGTCGGGCTGGGGAACCCTGGCTCTAAGTACCAATGGACCCGCCATAATGCGGGTTTCATGGTTTTAGACCGATTTTCCCAGGACGCCGGAATAGCGGTAACCAGGAAGAATTTTTCCGGCCTTTATGGAGAGGGGACCTATCATGGAGAGCGTCTTCTTCTTCTGAAGCCGCAAACCTTCATGAATCTTTCCGGGCGTTCCGTTGCAGCGGCCCTGAATTTCCATAAAATCGACATCCAGGACCTCATAGTCATCCACGATGACCTCGATATCCCCTTCGGGCGGGTAAAATTGAAGGAAGAGGGGGGGCATGCCGGCCATAACGGTCTTCGCTCCCTTTTGCAGGAACTGGGTAGCGGGCGGTTCGTCAGGCTGCGGATAGGGATAGGCCGCCCTCTCCATGATGACGCGGCGGATTACGTGCTCAGCAGCTTTTCCAGCGACGAATTGGCGAACCTGCCGCGGATTATTGATTGTGTGGCAGATCTGCTTAAACTTGTAATCGAAGAGGGGCTCCTTAAGGCGATGAGCATTTATCACAACAAAGAGCTGCTGGAGGGATGA
PROTEIN sequence
Length: 194
MATKLIVGLGNPGSKYQWTRHNAGFMVLDRFSQDAGIAVTRKNFSGLYGEGTYHGERLLLLKPQTFMNLSGRSVAAALNFHKIDIQDLIVIHDDLDIPFGRVKLKEEGGHAGHNGLRSLLQELGSGRFVRLRIGIGRPLHDDAADYVLSSFSSDELANLPRIIDCVADLLKLVIEEGLLKAMSIYHNKELLEG*