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PLM4_65_coex_sep16_scaffold_2519

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_2519_1
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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1..738
DNA (738bp) protein (246aa)
RND family efflux transporter MFP subunit bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RND family efflux transporter MFP subunit
Tax=CSP1_6_Rokubacteria
PLM4_65_coex_sep16_scaffold_2519_2
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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742..4074
DNA (3333bp) protein (1111aa)
Cation/multidrug efflux pump bin=GWC2_Methylomirabilis_70_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Cation/multidrug efflux pump
Tax=CSP1_6_Rokubacteria
PLM4_65_coex_sep16_scaffold_2519_3

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comp(4164..5627)
DNA (1464bp) protein (488aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI0003710D74
Marine sediment metagenome DNA, contig: S03H2_C01213 {ECO:0000313|EMBL:GAH30185.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
solute-binding component of ABC transporter
PLM4_65_coex_sep16_scaffold_2519_4

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comp(5755..6639)
DNA (885bp) protein (295aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11BT4_MESSB
Marine sediment metagenome DNA, contig: S01H4_C02701 {ECO:0000313|EMBL:GAG66460.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
binding-protein-dependent transport system inner membrane protein
PLM4_65_coex_sep16_scaffold_2519_5
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

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comp(6636..7541)
DNA (906bp) protein (302aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI0003817C62
carbohydrate ABC transporter membrane protein 1
Tax=Caldatribacterium saccharofermentans
PLM4_65_coex_sep16_scaffold_2519_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(7687..8526)
DNA (840bp) protein (280aa)
Binding-protein-dependent transport systems inner membrane component bin=GWA2_Methylomirabilis_73_35 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport systems inner membrane component
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_2519_7
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8527..9465)
DNA (939bp) protein (313aa)
Binding-protein-dependent transport systems inner membrane component bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. STM 3843 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter permease
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_65_coex_sep16_scaffold_2519_8
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9473..10747)
DNA (1275bp) protein (425aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sugar ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_65_coex_sep16_scaffold_2519_9
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(10872..11285)
DNA (414bp) protein (138aa)
medium-chain fatty-acid-CoA ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Displaying 9 items

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