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PLM4_65_coex_sep16_scaffold_2806

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_2806_1
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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3..215
DNA (213bp) protein (71aa)
ABC transporter related protein Tax=Afipia sp. 1NLS2 RepID=D6V7R8_9BRAD
Branched-chain amino acid transport ATP-binding protein LivF
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_coex_sep16_scaffold_2806_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(307..1566)
DNA (1260bp) protein (420aa)
Major facilitator transporter bin=GWE1_Burkholderiales_65_30 species=unknown genus=Pusillimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
major facilitator transporter
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_65_coex_sep16_scaffold_2806_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1583..2320)
DNA (738bp) protein (246aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00036371C7
extracellular solute-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_65_coex_sep16_scaffold_2806_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(2365..3714)
DNA (1350bp) protein (450aa)
Putative TRAP family transmembrane transporter protein bin=GWF2_Methylomirabilis_70_14 species=Citreicella sp. 357 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DctM family transporter
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_65_coex_sep16_scaffold_2806_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(3681..4202)
DNA (522bp) protein (174aa)
Putative transporter DctQ-like transmembrane protein bin=GWF2_Methylomirabilis_70_14 species=Citreicella sp. 357 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
tripartite ATP-independent periplasmic transporter, DctQ component
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_65_coex_sep16_scaffold_2806_6
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4232..5125)
DNA (894bp) protein (298aa)
Putative carboxymethylenebutenolidase (EC:3.1.1.45)
Tat pathway signal sequence domain protein Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A361_9PROT
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EHL99491.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
PLM4_65_coex_sep16_scaffold_2806_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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5282..6526
DNA (1245bp) protein (415aa)
Multidrug-efflux transporter bin=GWA2_Methylomirabilis_73_35 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_2806_8
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6866..7009)
DNA (144bp) protein (48aa)
DnaG primase-like protein (Fragment) Tax=Salmonella enterica subsp. enterica serovar Mbandaka str. ATCC 51958 RepID=V1VMD5_SALET
gene0018; putative DNA primase-like protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM4_65_coex_sep16_scaffold_2806_9
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(7166..9658)
DNA (2493bp) protein (831aa)
Rhs family protein Tax=Cupriavidus basilensis OR16 RepID=H1S024_9BURK
Teneurin-3
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM4_65_coex_sep16_scaffold_2806_10

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9750..10085
DNA (336bp) protein (112aa)
Transcriptional regulator, XRE family (Fragment) Tax=mine drainage metagenome RepID=T1B9B9_9ZZZZ
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EQD66497.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
phage regulatory protein
PLM4_65_coex_sep16_scaffold_2806_11
unknown

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comp(10327..10743)
DNA (417bp) protein (139aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_2806_12
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(10778..12583)
DNA (1806bp) protein (602aa)
Rhs family protein Tax=Cupriavidus basilensis OR16 RepID=H1S024_9BURK
RHS repeat-associated core domain protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Displaying 12 items

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