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PLM4_65_coex_sep16_scaffold_9314

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_9314_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2..412
DNA (411bp) protein (137aa)
Adenosylcobinamide-phosphate guanylyltransferase bin=GWF2_Methylomirabilis_70_14 species=Methylosinus trichosporium genus=Methylosinus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_9314_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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387..1439
DNA (1053bp) protein (351aa)
cobT; nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21); K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin7_NC10_sister organism_group=NC10
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_9314_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1436..2329
DNA (894bp) protein (298aa)
Periplasmic binding protein bin=GWA2_Methylomirabilis_73_35 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
cobalamide ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_9314_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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2326..3342
DNA (1017bp) protein (339aa)
btuC; vitamin B12 import system permease protein BtuC; K02015 iron complex transport system permease protein bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
btuC; vitamin B12 import system permease protein BtuC
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_9314_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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3339..4181
DNA (843bp) protein (281aa)
putative Vitamin B12 import system, ATP-binding protein BtuD (EC:3.6.3.-)
Iron-enterobactin transporter ATP-binding protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_9314_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4485..5429
DNA (945bp) protein (315aa)
Cobalamin uptake ligand-gated TonB-dependent outer membrane channel bin=GWC2_Methylomirabilis_70_24 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
TonB-dependent receptor
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 6 items

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