ggKbase home page

PLM4_65_coex_sep16_scaffold_32272

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_32272_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..111)
DNA (111bp) protein (37aa)
Enoyl CoA hydratase bin=GWA2_Methylomirabilis_73_35 species=Citreicella sp. 357 genus=Citreicella taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_32272_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(182..442)
DNA (261bp) protein (87aa)
Formyl-CoA transferase bin=GWA2_Methylomirabilis_73_35 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_32272_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(403..1230)
DNA (828bp) protein (276aa)
Formyl-CoA transferase bin=GWA2_Methylomirabilis_73_35 species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative acyl-CoA transferases/carnitine dehydratase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_32272_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1247..4048
DNA (2802bp) protein (934aa)
Histidine kinase bin=GWA2_Methylomirabilis_73_35 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative PAS/PAC sensor protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_32272_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

4045..4674
DNA (630bp) protein (210aa)
Putative two-component response regulator bin=GWC2_Methylomirabilis_70_16 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative two-component response regulator
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_coex_sep16_scaffold_32272_6
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4708..5004)
DNA (297bp) protein (99aa)
Redoxin domain protein bin=GWA2_Methylomirabilis_73_35 species=Oceaniovalibus guishaninsula genus=Oceaniovalibus taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alkyl hydroperoxide reductase
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_32272_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5023..5235)
DNA (213bp) protein (71aa)
Thioredoxin family protein bin=GWA2_Methylomirabilis_73_35 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
thioredoxin-like protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_65_coex_sep16_scaffold_32272_8
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(5232..5507)
DNA (276bp) protein (92aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen bin=GWA2_Methylomirabilis_73_35 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alkyl hydroperoxide reductase
Tax=RBG_16_NC10_65_8_curated
Displaying 8 items

View Taxonomy