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PLM4_65_coex_sep16_scaffold_19852

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_19852_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2..190)
DNA (189bp) protein (63aa)
D-amino-acid transaminase (EC:2.6.1.21)
Branched-chain amino acid aminotransferase bin=GWC2_Methylomirabilis_70_24 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_19852_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(216..971)
DNA (756bp) protein (252aa)
Amino acid ABC transporter ATP-binding protein bin=GWC2_Methylomirabilis_70_24 species=Nocardia brasiliensis genus=Nocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
amino acid ABC transporter ATP-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_19852_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(968..1624)
DNA (657bp) protein (219aa)
Putative glutamine ABC transporter permease protein GlnM bin=GWC2_Methylomirabilis_70_24 species=Sinorhizobium fredii genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glnM; glutamine ABC transporter permease GlnM
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_19852_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1640..2290)
DNA (651bp) protein (217aa)
Polar amino acid ABC transporter, inner membrane subunit bin=GWC2_Methylomirabilis_70_24 species=Sinorhizobium fredii genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
polar amino acid ABC transporter inner membrane subunit
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_19852_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2359..3198)
DNA (840bp) protein (280aa)
Glutamine-binding protein GlnH bin=GWC2_Methylomirabilis_70_24 species=Sinorhizobium fredii genus=Sinorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glnH; glutamine-binding protein GlnH
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_19852_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3240..3467)
DNA (228bp) protein (76aa)
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_19852_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(3464..4261)
DNA (798bp) protein (266aa)
alanine racemase (EC:5.1.1.1)
hypothetical protein Tax=gamma proteobacterium SCGC AB-629-K02 RepID=UPI00037E9813
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_19852_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4273..5529)
DNA (1257bp) protein (419aa)
Selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein; K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] bin=bin7_NC10_sister species=Stackebrandtia nassauensis genus=Stackebrandtia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
Selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_19852_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(5565..5921)
DNA (357bp) protein (119aa)
GntR-family regulator Tax=Streptomyces vitaminophilus RepID=A3R4S4_9ACTO
GntR family transcriptional regulator
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_65_coex_sep16_scaffold_19852_10
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6542..6937)
DNA (396bp) protein (132aa)
Endoribonuclease L-PSP {ECO:0000313|EMBL:KEO93482.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
Endoribonuclease L-PSP bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
endoribonuclease L-PSP
PLM4_65_coex_sep16_scaffold_19852_11
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6938..7786)
DNA (849bp) protein (283aa)
3-ketoacyl-ACP reductase Tax=Sphingomonas melonis RepID=UPI00037D542A
Uncharacterized protein {ECO:0000313|EMBL:KJS15525.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
3-oxoacyl-ACP reductase
PLM4_65_coex_sep16_scaffold_19852_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(7842..8180)
DNA (339bp) protein (113aa)
Putative branched-chain amino acid-binding protein Tax=Bordetella bronchiseptica 253 RepID=K4QEU1_BORBO
branched-chain amino acid-binding protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Displaying 12 items

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