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PLM4_65_coex_sep16_scaffold_16227

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_16227_1
unknown

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1..321
DNA (321bp) protein (107aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_16227_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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324..695
DNA (372bp) protein (124aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_16227_3
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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758..985
DNA (228bp) protein (76aa)
phosphopantothenate synthase Tax=Bartonella rattaustraliani RepID=UPI00031931DA
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EJM99592.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
PLM4_65_coex_sep16_scaffold_16227_4
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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982..1446
DNA (465bp) protein (155aa)
Ribonuclease VapC Tax=Methylosinus trichosporium OB3b RepID=D5QMK5_METTR
putative nucleic acid-binding protein, contains PIN domain
Tax=GWC2_Geobacteraceae_55_20_curated
PLM4_65_coex_sep16_scaffold_16227_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1451..1684)
DNA (234bp) protein (78aa)
ABC-type transporter, integral membrane subunit Tax=Caldithrix abyssi DSM 13497 RepID=H1XVK8_9BACT
ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_16227_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2090..2962)
DNA (873bp) protein (291aa)
Putative ABC transporter (Permease protein) Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFR5_9BACT
ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_16227_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2959..4230)
DNA (1272bp) protein (424aa)
Putative sugar ABC transporter, periplasmic sugar-binding protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFR6_9BACT
sugar ABC transporter periplasmic sugar-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_16227_8
unknown

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comp(4230..4349)
DNA (120bp) protein (40aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_16227_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(4383..4883)
DNA (501bp) protein (167aa)
MerB protein bin=GWA2_Methylomirabilis_73_35 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alkylmercury lyase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM4_65_coex_sep16_scaffold_16227_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4912..5298)
DNA (387bp) protein (129aa)
DNA ligase D bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
DNA ligase D
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 10 items

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