ggKbase home page

PLM4_65_coex_sep16_scaffold_6613

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_6613_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3..194
DNA (192bp) protein (64aa)
Glycosyl hydrolase, family 88 bin=GWA2_Methylomirabilis_73_35 species=Bradyrhizobium sp. CCGE-LA001 genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_6613_2
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

237..1301
DNA (1065bp) protein (355aa)
Oxidoreductase domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D0V7_9BACT
oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM4_65_coex_sep16_scaffold_6613_3
Thermosynechococcus sp. NK55a, Thermosynechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1321..2559
DNA (1239bp) protein (413aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI000362E427
ABC-type sugar uptake system substrate-binding component
ABC-type sugar uptake system substrate-binding component {ECO:0000313|EMBL:AHB88925.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Thermosynechococcus.;" source="Thermosynechococcus sp. NK55a.;"
PLM4_65_coex_sep16_scaffold_6613_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

2577..3467
DNA (891bp) protein (297aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00036C2DEB
ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_65_coex_sep16_scaffold_6613_5
Synechococcus sp. PCC 7002, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3454..4266
DNA (813bp) protein (271aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00037F9685
lacG; lactose transport system permease LacG
Lactose transport system permease protein LacG {ECO:0000313|EMBL:ACA99253.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) (Agmenellum; quadruplicatum).;"
PLM4_65_coex_sep16_scaffold_6613_6
unknown

Not on your lists

4263..4619
DNA (357bp) protein (119aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00036995A4
PLM4_65_coex_sep16_scaffold_6613_7
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4638..6605
DNA (1968bp) protein (656aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003649073
N-methylproline demethylase {ECO:0000313|EMBL:KHJ56160.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
NADH:flavin oxidoreductase
Displaying 7 items

View Taxonomy