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PLM4_65_coex_sep16_scaffold_4197

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_4197_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3..1424
DNA (1422bp) protein (474aa)
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein (EC:1.17.1.4)
Xanthine dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Magnetospirillum sp. SO-1 genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_4197_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2031..2366
DNA (336bp) protein (112aa)
Formyl-CoA transferase bin=GWC2_Methylomirabilis_70_16 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
L-carnitine dehydratase/bile acid-inducible protein F
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_4197_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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2363..3469
DNA (1107bp) protein (369aa)
NAD-dependent glycerol-3-phosphate dehydrogenase-like protein bin=GWA2_Methylomirabilis_73_35 species=Achromobacter xylosoxidans genus=Achromobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_4197_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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3466..3939
DNA (474bp) protein (158aa)
4-vinyl reductase 4VR bin=GWA2_Methylomirabilis_73_35 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_4197_5
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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4210..5487
DNA (1278bp) protein (426aa)
Putative Histidine kinase bin=GWC2_Chloroflexi_73_18 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PAS sensor protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM4_65_coex_sep16_scaffold_4197_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5493..7130
DNA (1638bp) protein (546aa)
Histidine kinase bin=GWC2_Methylomirabilis_70_16 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
histidine kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_coex_sep16_scaffold_4197_7
unknown

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7127..7300
DNA (174bp) protein (58aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4197_8
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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7592..7753
DNA (162bp) protein (54aa)
Phosphoglycerate mutase bin=GWA2_Methylomirabilis_73_35 species=Oxalobacteraceae bacterium IMCC9480 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RBG_16_Spirochaete_67_19_curated
PLM4_65_coex_sep16_scaffold_4197_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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7860..9539
DNA (1680bp) protein (560aa)
Putative periplasmic dipeptide transport substrate-binding protein Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0H6_THERP
Uncharacterized protein {ECO:0000313|EMBL:ETW95976.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
putative periplasmic dipeptide transport substrate-binding protein
PLM4_65_coex_sep16_scaffold_4197_10
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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9635..10591
DNA (957bp) protein (319aa)
Uncharacterized protein {ECO:0000313|EMBL:ETW97109.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
ABC transporter permease bin=GWC2_Methylomirabilis_70_24 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
glutathione ABC transporter permease
PLM4_65_coex_sep16_scaffold_4197_11
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10591..11529
DNA (939bp) protein (313aa)
Putative peptide ABC transporter permease protein bin=GWF2_Methylomirabilis_70_14 species=uncultured marine bacterium MedDCM-OCT-S11-C95 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
binding-protein-dependent transport systems inner membrane component
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_65_coex_sep16_scaffold_4197_12
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

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comp(11554..14658)
DNA (3105bp) protein (1035aa)
Metallophosphoesterase Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBC1_FLUTR
metallophosphoesterase
Tax=RBG_16_Acidobacteria_64_8_curated
PLM4_65_coex_sep16_scaffold_4197_13

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comp(14655..15422)
DNA (768bp) protein (256aa)
Tetratricopeptide TPR_2 repeat protein Tax=Pedosphaera parvula Ellin514 RepID=B9XCR1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKM07454.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Displaying 13 items

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