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PLM4_65_coex_sep16_scaffold_4621

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_4621_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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623..1150
DNA (528bp) protein (176aa)
SagB-type dehydrogenase domain protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Haloterrigena taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_4621_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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1156..2298
DNA (1143bp) protein (381aa)
sga; Serine-glyoxylate aminotransferase (EC:2.6.1.45)
Serine-glyoxylate aminotransferase bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_4621_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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2295..3731
DNA (1437bp) protein (479aa)
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
Tax=CSP1_6_Rokubacteria
PLM4_65_coex_sep16_scaffold_4621_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3848..4492
DNA (645bp) protein (215aa)
Phosphoglycerate mutase bin=GWA2_Methylomirabilis_73_35 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphoglycerate mutase
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_4621_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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4489..5802
DNA (1314bp) protein (438aa)
hisZ; ATP phosphoribosyltransferase regulatory subunit bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hisZ; ATP phosphoribosyltransferase regulatory subunit
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_4621_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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5795..7120
DNA (1326bp) protein (442aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase bin=GWA2_Methylomirabilis_73_35 species=Leptospirillum ferrooxidans genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_4621_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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7120..7563
DNA (444bp) protein (148aa)
cetoacetate metabolism regulatory protein atoC bin=GWA2_Methylomirabilis_73_35 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_65_coex_sep16_scaffold_4621_8
unknown

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comp(7560..7913)
DNA (354bp) protein (118aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4621_9
unknown

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8019..8243
DNA (225bp) protein (75aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4621_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(8336..8692)
DNA (357bp) protein (119aa)
Response regulator, CheY like Tax=Candidatus Nitrospira defluvii RepID=D8PE36_9BACT
CheY like response regulator
Response regulator, CheY like {ECO:0000313|EMBL:CBK41495.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM4_65_coex_sep16_scaffold_4621_11
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8805..9278
DNA (474bp) protein (158aa)
hypothetical protein Tax=Prevotella loescheii RepID=UPI00035FAB23
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ98939.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
PLM4_65_coex_sep16_scaffold_4621_12
unknown

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comp(9286..9639)
DNA (354bp) protein (118aa)

This feature has no annotations

PLM4_65_coex_sep16_scaffold_4621_trna_1
unknown

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9958..10030
DNA (73bp)
transferRNA Lys
PLM4_65_coex_sep16_scaffold_4621_13
unknown

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10160..10243
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 14 items

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