ggKbase home page

PLM4_65_coex_sep16_scaffold_38387

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_38387_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3..107)
DNA (105bp) protein (35aa)
GTP-binding protein YchF bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_38387_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

302..1051
DNA (750bp) protein (250aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
permease of the drug/metabolite transporter (DMT) family
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_38387_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1093..1464
DNA (372bp) protein (124aa)
7-cyano-7-deazaguanine reductase (EC:1.7.1.13); K09457 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
7-cyano-7-deazaguanine reductase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_38387_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1640..2029
DNA (390bp) protein (130aa)
Transcriptional regulator, Crp/Fnr family bin=GWC2_Methylomirabilis_70_16 species=Dictyoglomus turgidum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Crp/Fnr family transcriptional regulator
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_65_coex_sep16_scaffold_38387_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2074..2823)
DNA (750bp) protein (250aa)
Membrane protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Halothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_65_coex_sep16_scaffold_38387_6
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2955..3518)
DNA (564bp) protein (188aa)
Beta-ketoadipate enol-lactone hydrolase (EC:3.1.1.24)
Hydrolase, alpha/beta fold family bin=GWA2_Elusimicrobia_69_24 species=Pseudomonas putida genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
PLM4_65_coex_sep16_scaffold_38387_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

3752..4417
DNA (666bp) protein (222aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM4_65_coex_sep16_scaffold_38387_8
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4414..5616)
DNA (1203bp) protein (401aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX01364.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
L-carnitine dehydratase/bile acid-inducible protein F bin=bin7_NC10_sister species=Burkholderia sp. RPE64 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
L-carnitine dehydratase/bile acid-inducible protein F
Displaying 8 items

View Taxonomy