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PLM4_65_coex_sep16_scaffold_10635

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_10635_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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3..740
DNA (738bp) protein (246aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
(p)ppGpp synthetase SpoT/RelA
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_65_coex_sep16_scaffold_10635_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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832..1212
DNA (381bp) protein (127aa)
Putative uncharacterized protein Tax=Thermococcus onnurineus (strain NA1) RepID=B6YU72_THEON
endoribonuclease L-PSP
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_coex_sep16_scaffold_10635_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(1295..1513)
DNA (219bp) protein (73aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI00035CC850
50S ribosomal protein L28
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_coex_sep16_scaffold_10635_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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1702..3285
DNA (1584bp) protein (528aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
PAS sensor protein Tax=Holophaga foetida DSM 6591 RepID=H1P1L7_9BACT
GTPase-like protein
PLM4_65_coex_sep16_scaffold_10635_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

3368..4660
DNA (1293bp) protein (431aa)
Membrane protein involved in aromatic hydrocarbon degradation Tax=Caldithrix abyssi DSM 13497 RepID=H1XRQ1_9BACT bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
membrane protein involved in aromatic hydrocarbon degradation
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_65_coex_sep16_scaffold_10635_6
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(4661..5029)
DNA (369bp) protein (123aa)
hypothetical protein Tax=Meiothermus timidus RepID=UPI00037A21FE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI15235.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
Displaying 6 items

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